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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170042225
CDYU01001909
179755
Bacillota
CCG
Arg
>WENV170042326
CDYU01005263
480324
Bacillota
TTG
Gln
>WENV170042346
CDYU01005321
175868
Bacillota
GTT
Asn
>WENV170042473
CDYU01008871
186051
Bacillota
GAT
Ile
>WENV170042564
CDYU01011547
175868
Bacillota
GTT
Asn
>WENV170042576
CDYU01012101
303718
Bacillota
TGT
Thr
>WENV170042588
CDYU01012106
175825
Bacillota
GAT
Ile
>WENV170042587
CDYU01012106
280436
Bacillota
TGC
Ala
>WENV170042619
CDYU01012914
405363
Bacillota
GCA
Cys
>WENV170042615
CDYU01012914
280428
Bacillota
GAA
Phe
>WENV170042617
CDYU01012914
175849
Bacillota
GTC
Asp
>WENV170042624
CDYU01013008
179917
Bacillota
CAT
Met
>WENV170042670
CDYU01014307
280462
Bacillota
GAA
Phe
>WENV170042704
CDYU01015276
398852
Bacillota
CTC
Glu
>WENV170042730
CDYU01016155
295166
Bacillota
TGC
Ala
>WENV170042737
CDYU01016205
280492
Bacillota
CTT
Lys
>WENV170042784
CDYU01017148
175899
Bacillota
GTC
Asp
>WENV170042791
CDYU01017148
175857
Bacillota
GTG
His
>WENV170042793
CDYU01017148
280463
Bacillota
TTT
Lys
>WENV170042841
CDYU01018718
189473
Bacillota
GAT
Ile
>WENV170042844
CDYU01018743
73664
Bacillota
CAG
Leu
>WENV170042843
CDYU01018743
56079
Bacillota
AAG
Leu
>WENV170042846
CDYU01018751
398852
Bacillota
CTC
Glu
>WENV170042924
CDYU01021652
175842
Bacillota
CAC
Val
>WENV170042950
CDYU01022503
291581
Bacillota
CGG
Pro
>WENV170042949
CDYU01022503
480322
Bacillota
CTG
Gln
>WENV170042981
CDYU01023413
73009
Bacillota
CAG
Leu
>WENV170043093
CDYU01027273
284723
Bacillota
TAC
Val
>WENV170043114
CDYU01028112
280500
Bacillota
TGC
Ala
>WENV170043126
CDYU01028574
179810
Bacillota
TCT
Arg
>WENV170043150
CDYU01029420
398852
Bacillota
CTC
Glu
>WENV170043238
CDYU01032479
480322
Bacillota
CTG
Gln
>WENV170043293
CDYU01034242
46643
Bacillota
TGA
Ser
>WENV170043327
CDYU01035597
280500
Bacillota
TGC
Ala
>WENV170043352
CDYU01036098
46643
Bacillota
TGA
Ser
>WENV170043365
CDYU01036516
175831
Bacillota
ACG
Arg
>WENV170043418
CDYU01037777
179563
Bacillota
GAT
Ile
>WENV170043417
CDYU01037777
295166
Bacillota
TGC
Ala
>WENV170043438
CDYU01038730
280444
Bacillota
GGT
Thr
>WENV170043481
CDYU01039612
290325
Bacillota
GCC
Gly
>WENV170043478
CDYU01039612
312380
Bacillota
TAC
Val
>WENV170043483
CDYU01039621
280444
Bacillota
GGT
Thr
>WENV170043482
CDYU01039621
175849
Bacillota
GTC
Asp
>WENV170043525
CDYU01040221
73664
Bacillota
CAG
Leu
>WENV170043523
CDYU01040221
56079
Bacillota
AAG
Leu
>WENV170043524
CDYU01040221
56079
Bacillota
AAG
Leu
>WENV170043558
CDYU01041509
186051
Bacillota
GAT
Ile
>WENV170043567
CDYU01041533
175899
Bacillota
GTC
Asp
>WENV170043570
CDYU01041533
117745
Bacillota
GTA
Tyr
>WENV170043572
CDYU01041533
280462
Bacillota
GAA
Phe
>WENV170043573
CDYU01041533
280463
Bacillota
TTT
Lys
>WENV170043584
CDYU01041562
484885
Bacillota
TCC
Gly
>WENV170043738
CDYU01047262
280500
Bacillota
TGC
Ala
>WENV170043747
CDYU01047290
291576
Bacillota
CCC
Gly
>WENV170043773
CDYU01048202
280447
Bacillota
GAC
Val
>WENV170043821
CDYU01050043
398852
Bacillota
CTC
Glu
>WENV170043840
CDYU01050608
398854
Bacillota
CTC
Glu
>WENV170043848
CDYU01050895
280492
Bacillota
CTT
Lys
>WENV170043856
CDYU01051216
280428
Bacillota
GAA
Phe
>WENV170043889
CDYU01051925
5692
Bacillota
GCT
Ser
>WENV170043892
CDYU01052152
186051
Bacillota
GAT
Ile
>WENV170043947
CDYU01053322
73009
Bacillota
CAG
Leu
>WENV170044071
CDYU01057046
175859
Bacillota
TCT
Arg
>WENV170044118
CDYU01058428
280447
Bacillota
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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