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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170052909
CDZC01031910
99852
Bacillota
GTA
Tyr
>WENV170052910
CDZC01031917
99852
Bacillota
GTA
Tyr
>WENV170052058
CDZC01007988
349107
Bacillota
GCC
Gly
>WENV170052062
CDZC01007988
349107
Bacillota
GCC
Gly
>WENV170052188
CDZC01011770
349107
Bacillota
GCC
Gly
>WENV170052905
CDZC01031910
349107
Bacillota
GCC
Gly
>WENV170052907
CDZC01031910
349107
Bacillota
GCC
Gly
>WENV170052908
CDZC01031910
405363
Bacillota
GCA
Cys
>WENV170052061
CDZC01007988
280428
Bacillota
GAA
Phe
>WENV170052187
CDZC01011770
280428
Bacillota
GAA
Phe
>WENV170052059
CDZC01007988
280466
Bacillota
TAC
Val
>WENV170051813
CDZC01000304
175842
Bacillota
CAC
Val
>WENV170052302
CDZC01015118
287289
Bacillota
GCC
Gly
>WENV170052563
CDZC01021567
287289
Bacillota
GCC
Gly
>WENV170052307
CDZC01015365
236579
Bacillota
GAT
Ile
>WENV170052306
CDZC01015365
295166
Bacillota
TGC
Ala
>WENV170052360
CDZC01016294
215243
Bacillota
CAT
Met
>WENV170052375
CDZC01016554
215243
Bacillota
CAT
Met
>WENV170052064
CDZC01008231
190476
Bacillota
CAT
Met
>WENV170052852
CDZC01030801
190476
Bacillota
CAT
Met
>WENV170052669
CDZC01024330
280447
Bacillota
GAC
Val
>WENV170052933
CDZC01032215
280447
Bacillota
GAC
Val
>WENV170052236
CDZC01013236
5692
Bacillota
GCT
Ser
>WENV170052946
CDZC01032719
175825
Bacillota
GAT
Ile
>WENV170051864
CDZC01001324
73009
Bacillota
CAG
Leu
>WENV170052977
CDZC01033379
73009
Bacillota
CAG
Leu
>WENV170052361
CDZC01016294
460732
Bacillota
TTC
Glu
>WENV170052626
CDZC01022927
407726
Bacillota
CTG
Gln
>WENV170052627
CDZC01022927
407726
Bacillota
CTG
Gln
>WENV170052628
CDZC01022927
407726
Bacillota
CTG
Gln
>WENV170052140
CDZC01010337
291581
Bacillota
CGG
Pro
>WENV170052843
CDZC01030510
175859
Bacillota
TCT
Arg
>WENV170051966
CDZC01005304
398835
Bacillota
GCC
Gly
>WENV170052624
CDZC01022927
398835
Bacillota
GCC
Gly
>WENV170052806
CDZC01029156
398835
Bacillota
GCC
Gly
>WENV170052945
CDZC01032719
280436
Bacillota
TGC
Ala
>WENV170052308
CDZC01015391
175831
Bacillota
ACG
Arg
>WENV170051843
CDZC01000854
450453
Bacillota
CTC
Glu
>WENV170051844
CDZC01000854
450453
Bacillota
CTC
Glu
>WENV170052509
CDZC01020201
450453
Bacillota
CTC
Glu
>WENV170051875
CDZC01002089
295350
Bacillota
TGC
Ala
>WENV170052139
CDZC01010337
480322
Bacillota
CTG
Gln
>WENV170052642
CDZC01023526
480322
Bacillota
CTG
Gln
>WENV170052365
CDZC01016545
175868
Bacillota
GTT
Asn
>WENV170052781
CDZC01027910
175868
Bacillota
GTT
Asn
>WENV170052747
CDZC01027353
398854
Bacillota
CTC
Glu
>WENV170052780
CDZC01027910
398854
Bacillota
CTC
Glu
>WENV170052453
CDZC01018495
291576
Bacillota
CCC
Gly
>WENV170051865
CDZC01001398
480324
Bacillota
TTG
Gln
>WENV170052184
CDZC01011744
497729
Bacillota
CCA
Trp
>WENV170052795
CDZC01028197
73638
Bacillota
AAG
Leu
>WENV170052300
CDZC01015118
175911
Bacillota
GTC
Asp
>WENV170052772
CDZC01027877
175911
Bacillota
GTC
Asp
>WENV170052012
CDZC01006994
292374
Bacillota
TGC
Ala
>WENV170052792
CDZC01028195
280444
Bacillota
GGT
Thr
>WENV170052793
CDZC01028195
280444
Bacillota
GGT
Thr
>WENV170052785
CDZC01028152
321753
Bacillota
GCC
Gly
>WENV170052749
CDZC01027391
179755
Bacillota
CCG
Arg
>WENV170052854
CDZC01030801
179755
Bacillota
CCG
Arg
>WENV170052853
CDZC01030801
398832
Bacillota
TTC
Glu
>WENV170051970
CDZC01005521
332651
Bacillota
GTT
Asn
>WENV170052011
CDZC01006994
201856
Bacillota
GAT
Ile
>WENV170052278
CDZC01014386
398833
Bacillota
TGT
Thr
>WENV170052060
CDZC01007988
175849
Bacillota
GTC
Asp
>WENV170052189
CDZC01011770
175849
Bacillota
GTC
Asp
>WENV170052791
CDZC01028195
175849
Bacillota
GTC
Asp
>WENV170052904
CDZC01031910
175849
Bacillota
GTC
Asp
>WENV170052906
CDZC01031910
175849
Bacillota
GTC
Asp
>WENV170052235
CDZC01013236
56074
Bacillota
TGA
Ser
>WENV170051866
CDZC01001399
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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