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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170053093
CDZD01005894
179176
Bacillota
ACG
Arg
>WENV170053310
CDZD01020397
179917
Bacillota
CAT
Met
>WENV170053751
CDZD01042255
184687
Bacillota
CAT
Met
>WENV170053224
CDZD01015550
215243
Bacillota
CAT
Met
>WENV170053121
CDZD01007205
194260
Bacillota
GAT
Ile
>WENV170053136
CDZD01008093
179563
Bacillota
GAT
Ile
>WENV170053958
CDZD01052138
321753
Bacillota
GCC
Gly
>WENV170053415
CDZD01025496
25955
Bacillota
GCT
Ser
>WENV170053084
CDZD01005894
284723
Bacillota
TAC
Val
>WENV170053307
CDZD01020397
284723
Bacillota
TAC
Val
>WENV170053750
CDZD01042255
284723
Bacillota
TAC
Val
>WENV170053671
CDZD01038374
317482
Bacillota
TAC
Val
>WENV170053135
CDZD01008093
353153
Bacillota
TGC
Ala
>WENV170053101
CDZD01005940
356775
Bacillota
TGT
Thr
>WENV170053047
CDZD01004474
303718
Bacillota
TGT
Thr
>WENV170053640
CDZD01037833
303718
Bacillota
TGT
Thr
>WENV170053642
CDZD01037834
303718
Bacillota
TGT
Thr
>WENV170053795
CDZD01043528
303718
Bacillota
TGT
Thr
>WENV170053371
CDZD01023042
346451
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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