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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170056409
CDZG01000489
280427
Bacillota
TAC
Val
>WENV170056427
CDZG01001053
280476
Bacillota
TTT
Lys
>WENV170056432
CDZG01001144
229015
Bacillota
GTG
His
>WENV170056431
CDZG01001144
179810
Bacillota
TCT
Arg
>WENV170056491
CDZG01003982
405393
Bacillota
GCC
Gly
>WENV170056552
CDZG01006964
179917
Bacillota
CAT
Met
>WENV170056549
CDZG01006964
284723
Bacillota
TAC
Val
>WENV170056590
CDZG01007561
280444
Bacillota
GGT
Thr
>WENV170056596
CDZG01007953
194260
Bacillota
GAT
Ile
>WENV170056630
CDZG01008944
175915
Bacillota
GTC
Asp
>WENV170056693
CDZG01011999
280447
Bacillota
GAC
Val
>WENV170056698
CDZG01012073
175868
Bacillota
GTT
Asn
>WENV170056786
CDZG01015128
184539
Bacillota
TCT
Arg
>WENV170056797
CDZG01015285
175868
Bacillota
GTT
Asn
>WENV170056796
CDZG01015285
398854
Bacillota
CTC
Glu
>WENV170056802
CDZG01015533
175859
Bacillota
TCT
Arg
>WENV170056842
CDZG01017282
175831
Bacillota
ACG
Arg
>WENV170056905
CDZG01019115
280447
Bacillota
GAC
Val
>WENV170056948
CDZG01020927
291576
Bacillota
CCC
Gly
>WENV170056973
CDZG01021636
405393
Bacillota
GCC
Gly
>WENV170057030
CDZG01023545
179755
Bacillota
CCG
Arg
>WENV170057036
CDZG01024075
303718
Bacillota
TGT
Thr
>WENV170057088
CDZG01025650
317482
Bacillota
TAC
Val
>WENV170057093
CDZG01025670
398835
Bacillota
GCC
Gly
>WENV170057117
CDZG01026636
303718
Bacillota
TGT
Thr
>WENV170057125
CDZG01026696
190476
Bacillota
CAT
Met
>WENV170057126
CDZG01026696
398832
Bacillota
TTC
Glu
>WENV170057155
CDZG01027461
175842
Bacillota
CAC
Val
>WENV170057183
CDZG01028211
290325
Bacillota
GCC
Gly
>WENV170057202
CDZG01029237
280428
Bacillota
GAA
Phe
>WENV170057256
CDZG01031295
280500
Bacillota
TGC
Ala
>WENV170057306
CDZG01033341
58120
Bacillota
AAG
Leu
>WENV170057357
CDZG01035323
201856
Bacillota
GAT
Ile
>WENV170057374
CDZG01036037
303718
Bacillota
TGT
Thr
>WENV170057416
CDZG01038368
291581
Bacillota
CGG
Pro
>WENV170057415
CDZG01038368
480322
Bacillota
CTG
Gln
>WENV170057440
CDZG01038868
280486
Bacillota
TGC
Ala
>WENV170057454
CDZG01039462
398835
Bacillota
GCC
Gly
>WENV170057516
CDZG01040651
480324
Bacillota
TTG
Gln
>WENV170057530
CDZG01041078
398833
Bacillota
TGT
Thr
>WENV170057592
CDZG01043495
5692
Bacillota
GCT
Ser
>WENV170057591
CDZG01043495
56074
Bacillota
TGA
Ser
>WENV170057618
CDZG01044141
73009
Bacillota
CAG
Leu
>WENV170057652
CDZG01045144
179917
Bacillota
CAT
Met
>WENV170057669
CDZG01045763
290325
Bacillota
GCC
Gly
>WENV170057689
CDZG01046729
322848
Bacillota
CTT
Lys
>WENV170057732
CDZG01048836
287321
Bacillota
TGC
Ala
>WENV170057736
CDZG01048903
175868
Bacillota
GTT
Asn
>WENV170057803
CDZG01052052
280473
Bacillota
TGG
Pro
>WENV170057840
CDZG01053608
284723
Bacillota
TAC
Val
>WENV170057873
CDZG01054568
215243
Bacillota
CAT
Met
>WENV170057898
CDZG01056227
480322
Bacillota
CTG
Gln
>WENV170057929
CDZG01057343
322848
Bacillota
CTT
Lys
>WENV170057928
CDZG01057343
398854
Bacillota
CTC
Glu
>WENV170057985
CDZG01059484
215243
Bacillota
CAT
Met
>WENV170058116
CDZG01063866
186051
Bacillota
GAT
Ile
>WENV170058150
CDZG01064530
321248
Bacillota
TAC
Val
>WENV170058188
CDZG01065986
179563
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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