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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170062953
CDZK01000214
398854
Bacillota
CTC
Glu
>WENV170062968
CDZK01000893
290325
Bacillota
GCC
Gly
>WENV170062972
CDZK01001192
480324
Bacillota
TTG
Gln
>WENV170063060
CDZK01003874
398833
Bacillota
TGT
Thr
>WENV170063061
CDZK01003951
175831
Bacillota
ACG
Arg
>WENV170063079
CDZK01004786
73009
Bacillota
CAG
Leu
>WENV170063080
CDZK01004828
175842
Bacillota
CAC
Val
>WENV170063087
CDZK01004866
285756
Bacillota
GCC
Gly
>WENV170063103
CDZK01005201
175831
Bacillota
ACG
Arg
>WENV170063109
CDZK01005427
398833
Bacillota
TGT
Thr
>WENV170063137
CDZK01006346
291576
Bacillota
CCC
Gly
>WENV170063142
CDZK01006908
480322
Bacillota
CTG
Gln
>WENV170063143
CDZK01006908
291581
Bacillota
CGG
Pro
>WENV170063175
CDZK01007375
295350
Bacillota
TGC
Ala
>WENV170063242
CDZK01009350
175868
Bacillota
GTT
Asn
>WENV170063302
CDZK01011046
291576
Bacillota
CCC
Gly
>WENV170063308
CDZK01011279
56079
Bacillota
AAG
Leu
>WENV170063309
CDZK01011424
285756
Bacillota
GCC
Gly
>WENV170063332
CDZK01012046
175842
Bacillota
CAC
Val
>WENV170063433
CDZK01015875
280427
Bacillota
TAC
Val
>WENV170063435
CDZK01015875
280428
Bacillota
GAA
Phe
>WENV170063462
CDZK01016027
480322
Bacillota
CTG
Gln
>WENV170063465
CDZK01016242
179755
Bacillota
CCG
Arg
>WENV170063612
CDZK01019606
215243
Bacillota
CAT
Met
>WENV170063658
CDZK01021250
215243
Bacillota
CAT
Met
>WENV170063663
CDZK01021386
398852
Bacillota
CTC
Glu
>WENV170063712
CDZK01022108
280462
Bacillota
GAA
Phe
>WENV170063713
CDZK01022108
280463
Bacillota
TTT
Lys
>WENV170063723
CDZK01022716
398852
Bacillota
CTC
Glu
>WENV170063874
CDZK01027288
56074
Bacillota
TGA
Ser
>WENV170063875
CDZK01027337
480322
Bacillota
CTG
Gln
>WENV170063887
CDZK01027690
73009
Bacillota
CAG
Leu
>WENV170063921
CDZK01028798
480322
Bacillota
CTG
Gln
>WENV170063930
CDZK01029171
323864
Bacillota
TGC
Ala
>WENV170063943
CDZK01029528
321753
Bacillota
GCC
Gly
>WENV170063961
CDZK01029856
290325
Bacillota
GCC
Gly
>WENV170064061
CDZK01033096
480322
Bacillota
CTG
Gln
>WENV170064062
CDZK01033096
291581
Bacillota
CGG
Pro
>WENV170064073
CDZK01033566
175831
Bacillota
ACG
Arg
>WENV170064145
CDZK01035410
321753
Bacillota
GCC
Gly
>WENV170064155
CDZK01035439
398852
Bacillota
CTC
Glu
>WENV170064216
CDZK01037683
280462
Bacillota
GAA
Phe
>WENV170064263
CDZK01038856
398852
Bacillota
CTC
Glu
>WENV170064326
CDZK01041145
117745
Bacillota
GTA
Tyr
>WENV170064352
CDZK01042562
480324
Bacillota
TTG
Gln
>WENV170064362
CDZK01043098
295350
Bacillota
TGC
Ala
>WENV170064401
CDZK01044668
303718
Bacillota
TGT
Thr
>WENV170064429
CDZK01045434
295166
Bacillota
TGC
Ala
>WENV170064430
CDZK01045434
179563
Bacillota
GAT
Ile
>WENV170064535
CDZK01047542
321753
Bacillota
GCC
Gly
>WENV170064546
CDZK01047946
303718
Bacillota
TGT
Thr
>WENV170064580
CDZK01048925
175842
Bacillota
CAC
Val
>WENV170064588
CDZK01049309
480324
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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