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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170064617
CDZL01000707
175831
Bacillota
ACG
Arg
>WENV170064842
CDZL01006562
175842
Bacillota
CAC
Val
>WENV170065110
CDZL01014469
73009
Bacillota
CAG
Leu
>WENV170064834
CDZL01006408
215243
Bacillota
CAT
Met
>WENV170064892
CDZL01007907
215243
Bacillota
CAT
Met
>WENV170064618
CDZL01000707
190476
Bacillota
CAT
Met
>WENV170064718
CDZL01003581
184495
Bacillota
CAT
Met
>WENV170065377
CDZL01023575
482593
Bacillota
CCC
Gly
>WENV170064671
CDZL01001591
291576
Bacillota
CCC
Gly
>WENV170064616
CDZL01000707
179755
Bacillota
CCG
Arg
>WENV170064800
CDZL01005846
291581
Bacillota
CGG
Pro
>WENV170064761
CDZL01005202
398854
Bacillota
CTC
Glu
>WENV170064988
CDZL01010892
398854
Bacillota
CTC
Glu
>WENV170064799
CDZL01005846
480322
Bacillota
CTG
Gln
>WENV170064926
CDZL01008942
480322
Bacillota
CTG
Gln
>WENV170064762
CDZL01005202
322848
Bacillota
CTT
Lys
>WENV170065207
CDZL01017847
322848
Bacillota
CTT
Lys
>WENV170064839
CDZL01006554
280428
Bacillota
GAA
Phe
>WENV170065226
CDZL01018204
280428
Bacillota
GAA
Phe
>WENV170065068
CDZL01013081
291553
Bacillota
GAA
Phe
>WENV170064690
CDZL01002317
284627
Bacillota
GAA
Phe
>WENV170064952
CDZL01009938
280447
Bacillota
GAC
Val
>WENV170065342
CDZL01022859
280447
Bacillota
GAC
Val
>WENV170065253
CDZL01018923
175825
Bacillota
GAT
Ile
>WENV170065219
CDZL01018173
201856
Bacillota
GAT
Ile
>WENV170065373
CDZL01023558
201856
Bacillota
GAT
Ile
>WENV170065230
CDZL01018204
405363
Bacillota
GCA
Cys
>WENV170065139
CDZL01015205
491377
Bacillota
GCA
Cys
>WENV170065186
CDZL01016821
491377
Bacillota
GCA
Cys
>WENV170064836
CDZL01006554
349107
Bacillota
GCC
Gly
>WENV170064840
CDZL01006554
349107
Bacillota
GCC
Gly
>WENV170065227
CDZL01018204
349107
Bacillota
GCC
Gly
>WENV170065229
CDZL01018204
349107
Bacillota
GCC
Gly
>WENV170064904
CDZL01008309
287289
Bacillota
GCC
Gly
>WENV170064918
CDZL01008534
287289
Bacillota
GCC
Gly
>WENV170064866
CDZL01007158
321753
Bacillota
GCC
Gly
>WENV170064911
CDZL01008532
321753
Bacillota
GCC
Gly
>WENV170065107
CDZL01014446
445407
Bacillota
GCC
Gly
>WENV170065304
CDZL01021206
5692
Bacillota
GCT
Ser
>WENV170064753
CDZL01004788
20942
Bacillota
GGA
Ser
>WENV170064841
CDZL01006562
280444
Bacillota
GGT
Thr
>WENV170065113
CDZL01014469
280444
Bacillota
GGT
Thr
>WENV170064916
CDZL01008534
175911
Bacillota
GTC
Asp
>WENV170065128
CDZL01014871
175911
Bacillota
GTC
Asp
>WENV170064771
CDZL01005531
280547
Bacillota
GTC
Asp
>WENV170065067
CDZL01013081
280547
Bacillota
GTC
Asp
>WENV170064838
CDZL01006554
175849
Bacillota
GTC
Asp
>WENV170065112
CDZL01014469
175849
Bacillota
GTC
Asp
>WENV170065228
CDZL01018204
175849
Bacillota
GTC
Asp
>WENV170064945
CDZL01009901
289716
Bacillota
GTG
His
>WENV170064927
CDZL01008942
175868
Bacillota
GTT
Asn
>WENV170064989
CDZL01010892
175868
Bacillota
GTT
Asn
>WENV170065108
CDZL01014446
333281
Bacillota
GTT
Asn
>WENV170064837
CDZL01006554
280466
Bacillota
TAC
Val
>WENV170065055
CDZL01012643
289715
Bacillota
TAC
Val
>WENV170064692
CDZL01002499
119459
Bacillota
TAG
Leu
>WENV170065095
CDZL01014039
119459
Bacillota
TAG
Leu
>WENV170064717
CDZL01003429
480337
Bacillota
TCC
Gly
>WENV170065161
CDZL01015842
175859
Bacillota
TCT
Arg
>WENV170064656
CDZL01001243
48505
Bacillota
TGA
Ser
>WENV170065303
CDZL01021206
56074
Bacillota
TGA
Ser
>WENV170065252
CDZL01018923
280436
Bacillota
TGC
Ala
>WENV170064966
CDZL01010274
295350
Bacillota
TGC
Ala
>WENV170064634
CDZL01000908
323864
Bacillota
TGC
Ala
>WENV170065374
CDZL01023558
292374
Bacillota
TGC
Ala
>WENV170064948
CDZL01009922
294275
Bacillota
TGC
Ala
>WENV170065191
CDZL01017111
280486
Bacillota
TGC
Ala
>WENV170064716
CDZL01003429
208539
Bacillota
TGG
Pro
>WENV170064707
CDZL01002922
280473
Bacillota
TGG
Pro
>WENV170064820
CDZL01006038
289713
Bacillota
TGT
Thr
>WENV170065182
CDZL01016783
303718
Bacillota
TGT
Thr
>WENV170065118
CDZL01014656
398833
Bacillota
TGT
Thr
>WENV170064619
CDZL01000707
398832
Bacillota
TTC
Glu
>WENV170064946
CDZL01009901
404091
Bacillota
TTG
Gln
>WENV170064801
CDZL01005846
480324
Bacillota
TTG
Gln
>WENV170064947
CDZL01009901
289761
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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