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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170067114
CDZO01001181
398835
Bacillota
GCC
Gly
>WENV170067141
CDZO01002009
398835
Bacillota
GCC
Gly
>WENV170067145
CDZO01002244
175831
Bacillota
ACG
Arg
>WENV170067152
CDZO01002498
295350
Bacillota
TGC
Ala
>WENV170067208
CDZO01004257
175842
Bacillota
CAC
Val
>WENV170067215
CDZO01004777
179166
Bacillota
TCT
Arg
>WENV170067237
CDZO01005469
175842
Bacillota
CAC
Val
>WENV170067253
CDZO01006052
349107
Bacillota
GCC
Gly
>WENV170067254
CDZO01006052
175849
Bacillota
GTC
Asp
>WENV170067255
CDZO01006052
349107
Bacillota
GCC
Gly
>WENV170067256
CDZO01006052
405363
Bacillota
GCA
Cys
>WENV170067275
CDZO01006728
480324
Bacillota
TTG
Gln
>WENV170067302
CDZO01007751
280447
Bacillota
GAC
Val
>WENV170067325
CDZO01008094
407726
Bacillota
CTG
Gln
>WENV170067326
CDZO01008094
407726
Bacillota
CTG
Gln
>WENV170067334
CDZO01008383
201856
Bacillota
GAT
Ile
>WENV170067345
CDZO01008779
184120
Bacillota
ACG
Arg
>WENV170067363
CDZO01009797
287289
Bacillota
GCC
Gly
>WENV170067373
CDZO01010312
480322
Bacillota
CTG
Gln
>WENV170067374
CDZO01010312
291581
Bacillota
CGG
Pro
>WENV170067388
CDZO01010378
215243
Bacillota
CAT
Met
>WENV170067413
CDZO01011664
290325
Bacillota
GCC
Gly
>WENV170067414
CDZO01011666
398833
Bacillota
TGT
Thr
>WENV170067421
CDZO01011728
73009
Bacillota
CAG
Leu
>WENV170067434
CDZO01012274
190476
Bacillota
CAT
Met
>WENV170067435
CDZO01012274
398832
Bacillota
TTC
Glu
>WENV170067445
CDZO01012336
179755
Bacillota
CCG
Arg
>WENV170067454
CDZO01012672
73009
Bacillota
CAG
Leu
>WENV170067459
CDZO01013258
175859
Bacillota
TCT
Arg
>WENV170067497
CDZO01014149
290325
Bacillota
GCC
Gly
>WENV170067502
CDZO01014367
280447
Bacillota
GAC
Val
>WENV170067513
CDZO01015118
190476
Bacillota
CAT
Met
>WENV170067514
CDZO01015118
398832
Bacillota
TTC
Glu
>WENV170067517
CDZO01015401
294275
Bacillota
TGC
Ala
>WENV170067518
CDZO01015401
236579
Bacillota
GAT
Ile
>WENV170067563
CDZO01016639
480322
Bacillota
CTG
Gln
>WENV170067637
CDZO01020126
321753
Bacillota
GCC
Gly
>WENV170067653
CDZO01020747
398835
Bacillota
GCC
Gly
>WENV170067701
CDZO01022698
349107
Bacillota
GCC
Gly
>WENV170067727
CDZO01023355
398854
Bacillota
CTC
Glu
>WENV170067728
CDZO01023355
175868
Bacillota
GTT
Asn
>WENV170067744
CDZO01023537
73009
Bacillota
CAG
Leu
>WENV170067762
CDZO01024916
284723
Bacillota
TAC
Val
>WENV170067770
CDZO01025195
398835
Bacillota
GCC
Gly
>WENV170067774
CDZO01025374
303718
Bacillota
TGT
Thr
>WENV170067775
CDZO01025444
56074
Bacillota
TGA
Ser
>WENV170067786
CDZO01025571
303718
Bacillota
TGT
Thr
>WENV170067789
CDZO01025573
280486
Bacillota
TGC
Ala
>WENV170067828
CDZO01026339
73638
Bacillota
AAG
Leu
>WENV170067833
CDZO01026581
280436
Bacillota
TGC
Ala
>WENV170067834
CDZO01026581
175825
Bacillota
GAT
Ile
>WENV170067849
CDZO01026845
497729
Bacillota
CCA
Trp
>WENV170067913
CDZO01028487
73638
Bacillota
AAG
Leu
>WENV170067914
CDZO01028488
284723
Bacillota
TAC
Val
>WENV170067933
CDZO01029386
175868
Bacillota
GTT
Asn
>WENV170067942
CDZO01029516
215243
Bacillota
CAT
Met
>WENV170067975
CDZO01030727
280428
Bacillota
GAA
Phe
>WENV170067976
CDZO01030727
349107
Bacillota
GCC
Gly
>WENV170067977
CDZO01030727
175849
Bacillota
GTC
Asp
>WENV170067988
CDZO01031065
480322
Bacillota
CTG
Gln
>WENV170068001
CDZO01032084
179755
Bacillota
CCG
Arg
>WENV170068005
CDZO01032277
280444
Bacillota
GGT
Thr
>WENV170068006
CDZO01032277
175849
Bacillota
GTC
Asp
>WENV170068007
CDZO01032277
280444
Bacillota
GGT
Thr
>WENV170068008
CDZO01032277
175849
Bacillota
GTC
Asp
>WENV170068009
CDZO01032404
323864
Bacillota
TGC
Ala
>WENV170068040
CDZO01033047
398835
Bacillota
GCC
Gly
>WENV170068060
CDZO01034046
175849
Bacillota
GTC
Asp
>WENV170068061
CDZO01034046
280444
Bacillota
GGT
Thr
>WENV170068062
CDZO01034046
175849
Bacillota
GTC
Asp
>WENV170068063
CDZO01034046
280444
Bacillota
GGT
Thr
>WENV170068064
CDZO01034046
280473
Bacillota
TGG
Pro
>WENV170068085
CDZO01034562
236579
Bacillota
GAT
Ile
>WENV170068095
CDZO01034962
280473
Bacillota
TGG
Pro
>WENV170068216
CDZO01039780
73638
Bacillota
AAG
Leu
>WENV170068241
CDZO01041004
349107
Bacillota
GCC
Gly
>WENV170068242
CDZO01041004
280466
Bacillota
TAC
Val
>WENV170068243
CDZO01041004
175849
Bacillota
GTC
Asp
>WENV170068244
CDZO01041004
280428
Bacillota
GAA
Phe
>WENV170068245
CDZO01041004
349107
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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