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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
65 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170083474
CEAA01034464
349107
Bacillota
GCC
Gly
>WENV170084024
CEAA01054001
349107
Bacillota
GCC
Gly
>WENV170083473
CEAA01034464
280428
Bacillota
GAA
Phe
>WENV170083370
CEAA01030527
229015
Bacillota
GTG
His
>WENV170083082
CEAA01020500
175842
Bacillota
CAC
Val
>WENV170083917
CEAA01050214
175842
Bacillota
CAC
Val
>WENV170083212
CEAA01026488
236579
Bacillota
GAT
Ile
>WENV170083119
CEAA01022391
179563
Bacillota
GAT
Ile
>WENV170083211
CEAA01026488
295166
Bacillota
TGC
Ala
>WENV170083888
CEAA01049427
190476
Bacillota
CAT
Met
>WENV170083364
CEAA01030293
280447
Bacillota
GAC
Val
>WENV170082850
CEAA01010655
5692
Bacillota
GCT
Ser
>WENV170083201
CEAA01026068
5692
Bacillota
GCT
Ser
>WENV170083133
CEAA01023103
284723
Bacillota
TAC
Val
>WENV170083410
CEAA01031836
284723
Bacillota
TAC
Val
>WENV170083534
CEAA01036815
284723
Bacillota
TAC
Val
>WENV170082927
CEAA01013649
73009
Bacillota
CAG
Leu
>WENV170083967
CEAA01052435
73009
Bacillota
CAG
Leu
>WENV170083484
CEAA01034956
291581
Bacillota
CGG
Pro
>WENV170083593
CEAA01038428
291581
Bacillota
CGG
Pro
>WENV170083556
CEAA01036904
175859
Bacillota
TCT
Arg
>WENV170082804
CEAA01009397
175831
Bacillota
ACG
Arg
>WENV170083118
CEAA01022391
353153
Bacillota
TGC
Ala
>WENV170083369
CEAA01030527
179810
Bacillota
TCT
Arg
>WENV170083124
CEAA01022551
27216
Bacillota
GCT
Ser
>WENV170083483
CEAA01034956
480322
Bacillota
CTG
Gln
>WENV170083592
CEAA01038428
480322
Bacillota
CTG
Gln
>WENV170083796
CEAA01045850
480322
Bacillota
CTG
Gln
>WENV170083985
CEAA01052665
480322
Bacillota
CTG
Gln
>WENV170083688
CEAA01042217
175868
Bacillota
GTT
Asn
>WENV170083712
CEAA01042633
175868
Bacillota
GTT
Asn
>WENV170083711
CEAA01042633
398854
Bacillota
CTC
Glu
>WENV170083225
CEAA01027043
291576
Bacillota
CCC
Gly
>WENV170083656
CEAA01040906
291576
Bacillota
CCC
Gly
>WENV170082569
CEAA01000741
480324
Bacillota
TTG
Gln
>WENV170082692
CEAA01005220
480324
Bacillota
TTG
Gln
>WENV170083642
CEAA01040211
497729
Bacillota
CCA
Trp
>WENV170082702
CEAA01005623
497729
Bacillota
CCA
Trp
>WENV170082908
CEAA01012824
303718
Bacillota
TGT
Thr
>WENV170083228
CEAA01027261
303718
Bacillota
TGT
Thr
>WENV170083069
CEAA01019769
186051
Bacillota
GAT
Ile
>WENV170083957
CEAA01051925
398857
Bacillota
TTC
Glu
>WENV170082951
CEAA01014548
117745
Bacillota
GTA
Tyr
>WENV170082772
CEAA01008527
280444
Bacillota
GGT
Thr
>WENV170083053
CEAA01018959
280444
Bacillota
GGT
Thr
>WENV170083788
CEAA01045725
280444
Bacillota
GGT
Thr
>WENV170083240
CEAA01027579
317482
Bacillota
TAC
Val
>WENV170083081
CEAA01020285
342104
Bacillota
TAC
Val
>WENV170083132
CEAA01023098
342104
Bacillota
TAC
Val
>WENV170083909
CEAA01049845
342104
Bacillota
TAC
Val
>WENV170083844
CEAA01047757
179755
Bacillota
CCG
Arg
>WENV170082600
CEAA01001848
398832
Bacillota
TTC
Glu
>WENV170083152
CEAA01024081
398832
Bacillota
TTC
Glu
>WENV170082816
CEAA01009808
25955
Bacillota
GCT
Ser
>WENV170082785
CEAA01008947
398852
Bacillota
CTC
Glu
>WENV170083868
CEAA01048670
398852
Bacillota
CTC
Glu
>WENV170083019
CEAA01017553
360353
Bacillota
CTT
Lys
>WENV170083725
CEAA01043066
360353
Bacillota
CTT
Lys
>WENV170083880
CEAA01049003
360353
Bacillota
CTT
Lys
>WENV170083365
CEAA01030465
285756
Bacillota
GCC
Gly
>WENV170083107
CEAA01021708
398833
Bacillota
TGT
Thr
>WENV170083052
CEAA01018959
175849
Bacillota
GTC
Asp
>WENV170083472
CEAA01034464
175849
Bacillota
GTC
Asp
>WENV170082849
CEAA01010655
56074
Bacillota
TGA
Ser
>WENV170083054
CEAA01018959
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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