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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170087112
CEAC01031615
510477
Bacillota
TCC
Gly
>WENV170086673
CEAC01016829
99852
Bacillota
GTA
Tyr
>WENV170086843
CEAC01023126
99852
Bacillota
GTA
Tyr
>WENV170086331
CEAC01004879
234991
Bacillota
GAT
Ile
>WENV170086481
CEAC01009981
280500
Bacillota
TGC
Ala
>WENV170086562
CEAC01012586
349107
Bacillota
GCC
Gly
>WENV170086566
CEAC01012586
349107
Bacillota
GCC
Gly
>WENV170086841
CEAC01023126
349107
Bacillota
GCC
Gly
>WENV170086842
CEAC01023126
405363
Bacillota
GCA
Cys
>WENV170086565
CEAC01012586
280428
Bacillota
GAA
Phe
>WENV170086605
CEAC01013920
280428
Bacillota
GAA
Phe
>WENV170087051
CEAC01029340
280428
Bacillota
GAA
Phe
>WENV170086501
CEAC01010327
229015
Bacillota
GTG
His
>WENV170087256
CEAC01037061
179917
Bacillota
CAT
Met
>WENV170086563
CEAC01012586
280466
Bacillota
TAC
Val
>WENV170087078
CEAC01030448
175842
Bacillota
CAC
Val
>WENV170087200
CEAC01035583
179563
Bacillota
GAT
Ile
>WENV170086416
CEAC01007798
190476
Bacillota
CAT
Met
>WENV170086622
CEAC01014840
280447
Bacillota
GAC
Val
>WENV170086873
CEAC01024177
280447
Bacillota
GAC
Val
>WENV170086942
CEAC01027400
280447
Bacillota
GAC
Val
>WENV170086225
CEAC01000706
5692
Bacillota
GCT
Ser
>WENV170087049
CEAC01029340
280427
Bacillota
TAC
Val
>WENV170086737
CEAC01020183
73009
Bacillota
CAG
Leu
>WENV170087223
CEAC01036291
73009
Bacillota
CAG
Leu
>WENV170087284
CEAC01037854
73009
Bacillota
CAG
Leu
>WENV170086549
CEAC01011899
291581
Bacillota
CGG
Pro
>WENV170086528
CEAC01011289
175859
Bacillota
TCT
Arg
>WENV170087312
CEAC01039516
175831
Bacillota
ACG
Arg
>WENV170087199
CEAC01035583
353153
Bacillota
TGC
Ala
>WENV170086905
CEAC01025495
332181
Bacillota
TGT
Thr
>WENV170086525
CEAC01010958
455259
Bacillota
TTC
Glu
>WENV170086548
CEAC01011899
480322
Bacillota
CTG
Gln
>WENV170087287
CEAC01038138
480322
Bacillota
CTG
Gln
>WENV170086377
CEAC01006746
175868
Bacillota
GTT
Asn
>WENV170086712
CEAC01019040
175868
Bacillota
GTT
Asn
>WENV170086376
CEAC01006746
398854
Bacillota
CTC
Glu
>WENV170086978
CEAC01028058
291576
Bacillota
CCC
Gly
>WENV170086441
CEAC01008430
497729
Bacillota
CCA
Trp
>WENV170086870
CEAC01024167
323864
Bacillota
TGC
Ala
>WENV170086646
CEAC01015209
280444
Bacillota
GGT
Thr
>WENV170087122
CEAC01032060
280444
Bacillota
GGT
Thr
>WENV170086945
CEAC01027401
342104
Bacillota
TAC
Val
>WENV170086719
CEAC01019578
179755
Bacillota
CCG
Arg
>WENV170086332
CEAC01004879
291650
Bacillota
TGC
Ala
>WENV170086417
CEAC01007798
398832
Bacillota
TTC
Glu
>WENV170087189
CEAC01035031
398833
Bacillota
TGT
Thr
>WENV170086564
CEAC01012586
175849
Bacillota
GTC
Asp
>WENV170086645
CEAC01015209
175849
Bacillota
GTC
Asp
>WENV170086840
CEAC01023126
175849
Bacillota
GTC
Asp
>WENV170086224
CEAC01000706
56074
Bacillota
TGA
Ser
>WENV170086402
CEAC01007378
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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