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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
101 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170092626
CEAG01053050
158247
Bacillota
>WENV170091538
CEAG01014656
256380
Bacillota
>WENV170092463
CEAG01047835
44859
Bacillota
AAG
Leu
>WENV170092180
CEAG01038709
44859
Bacillota
AAG
Leu
>WENV170091143
CEAG01000466
144583
Bacillota
ACG
Arg
>WENV170092685
CEAG01055051
144594
Bacillota
CAC
Val
>WENV170092464
CEAG01047835
59312
Bacillota
CAG
Leu
>WENV170091614
CEAG01017849
59312
Bacillota
CAG
Leu
>WENV170091293
CEAG01006189
59312
Bacillota
CAG
Leu
>WENV170092049
CEAG01034015
58712
Bacillota
CAG
Leu
>WENV170092818
CEAG01060281
169968
Bacillota
CAT
Met
>WENV170092550
CEAG01051483
169968
Bacillota
CAT
Met
>WENV170092040
CEAG01033541
298620
Bacillota
CAT
Met
>WENV170091802
CEAG01024876
298620
Bacillota
CAT
Met
>WENV170092688
CEAG01055388
429429
Bacillota
CCA
Trp
>WENV170092603
CEAG01052475
429429
Bacillota
CCA
Trp
>WENV170091969
CEAG01031108
429429
Bacillota
CCA
Trp
>WENV170091834
CEAG01025919
429429
Bacillota
CCA
Trp
>WENV170091318
CEAG01006916
429429
Bacillota
CCA
Trp
>WENV170092004
CEAG01032123
245386
Bacillota
CCA
Trp
>WENV170091845
CEAG01026381
245386
Bacillota
CCA
Trp
>WENV170091519
CEAG01013763
245386
Bacillota
CCA
Trp
>WENV170092643
CEAG01053650
245296
Bacillota
CCC
Gly
>WENV170091869
CEAG01027266
414486
Bacillota
CCC
Gly
>WENV170092163
CEAG01037903
245298
Bacillota
CGG
Pro
>WENV170092656
CEAG01053968
338147
Bacillota
CTC
Glu
>WENV170091876
CEAG01027267
338147
Bacillota
CTC
Glu
>WENV170091269
CEAG01005168
338147
Bacillota
CTC
Glu
>WENV170091441
CEAG01010909
338149
Bacillota
CTC
Glu
>WENV170092770
CEAG01058719
411547
Bacillota
CTG
Gln
>WENV170092162
CEAG01037903
411547
Bacillota
CTG
Gln
>WENV170091516
CEAG01013763
238910
Bacillota
CTT
Lys
>WENV170092679
CEAG01054884
272992
Bacillota
CTT
Lys
>WENV170092551
CEAG01051483
313454
Bacillota
GAA
Phe
>WENV170091795
CEAG01024512
235079
Bacillota
GAA
Phe
>WENV170092303
CEAG01043026
238974
Bacillota
GAA
Phe
>WENV170091874
CEAG01027266
238974
Bacillota
GAA
Phe
>WENV170091722
CEAG01021227
235113
Bacillota
GAA
Phe
>WENV170091488
CEAG01011884
235113
Bacillota
GAA
Phe
>WENV170092480
CEAG01048656
245344
Bacillota
GAA
Phe
>WENV170092393
CEAG01045386
245344
Bacillota
GAA
Phe
>WENV170092095
CEAG01034944
235098
Bacillota
GAC
Val
>WENV170092205
CEAG01039572
235098
Bacillota
GAC
Val
>WENV170091975
CEAG01031528
173314
Bacillota
GAT
Ile
>WENV170091906
CEAG01029143
173314
Bacillota
GAT
Ile
>WENV170091597
CEAG01017296
153911
Bacillota
GAT
Ile
>WENV170092482
CEAG01048656
419639
Bacillota
GCA
Cys
>WENV170092018
CEAG01032958
304022
Bacillota
GCC
Gly
>WENV170091588
CEAG01016788
304022
Bacillota
GCC
Gly
>WENV170091337
CEAG01007643
304022
Bacillota
GCC
Gly
>WENV170092774
CEAG01058749
271471
Bacillota
GCC
Gly
>WENV170092365
CEAG01044435
271471
Bacillota
GCC
Gly
>WENV170092481
CEAG01048656
344240
Bacillota
GCC
Gly
>WENV170092477
CEAG01048656
344240
Bacillota
GCC
Gly
>WENV170092182
CEAG01038716
344240
Bacillota
GCC
Gly
>WENV170091955
CEAG01031019
4624
Bacillota
GCT
Ser
>WENV170092099
CEAG01035027
11034
Bacillota
GGA
Ser
>WENV170091283
CEAG01005654
277200
Bacillota
GGC
Ala
>WENV170092400
CEAG01045840
235095
Bacillota
GGT
Thr
>WENV170091253
CEAG01004680
235095
Bacillota
GGT
Thr
>WENV170092151
CEAG01036914
243098
Bacillota
GGT
Thr
>WENV170092655
CEAG01053968
95563
Bacillota
GTA
Tyr
>WENV170091338
CEAG01007643
196621
Bacillota
GTC
Asp
>WENV170091590
CEAG01016788
196621
Bacillota
GTC
Asp
>WENV170092399
CEAG01045840
196621
Bacillota
GTC
Asp
>WENV170092078
CEAG01034507
144599
Bacillota
GTC
Asp
>WENV170092581
CEAG01051980
157838
Bacillota
GTC
Asp
>WENV170092479
CEAG01048656
196632
Bacillota
GTC
Asp
>WENV170092476
CEAG01048656
196632
Bacillota
GTC
Asp
>WENV170092392
CEAG01045386
196632
Bacillota
GTC
Asp
>WENV170092565
CEAG01051888
156937
Bacillota
GTG
His
>WENV170092085
CEAG01034507
144610
Bacillota
GTG
His
>WENV170092058
CEAG01034055
144610
Bacillota
GTG
His
>WENV170091627
CEAG01018347
144610
Bacillota
GTG
His
>WENV170092668
CEAG01054426
235154
Bacillota
GTT
Asn
>WENV170092074
CEAG01034507
235154
Bacillota
GTT
Asn
>WENV170092317
CEAG01043420
144621
Bacillota
GTT
Asn
>WENV170092156
CEAG01037226
144621
Bacillota
GTT
Asn
>WENV170092113
CEAG01035826
144621
Bacillota
GTT
Asn
>WENV170091371
CEAG01008580
144621
Bacillota
GTT
Asn
>WENV170091589
CEAG01016788
235117
Bacillota
TAC
Val
>WENV170091793
CEAG01024512
235078
Bacillota
TAC
Val
>WENV170092771
CEAG01058749
263765
Bacillota
TAC
Val
>WENV170092363
CEAG01044435
263765
Bacillota
TAC
Val
>WENV170092700
CEAG01055925
313104
Bacillota
TAC
Val
>WENV170092177
CEAG01038621
144612
Bacillota
TCT
Arg
>WENV170092084
CEAG01034507
148239
Bacillota
TCT
Arg
>WENV170092564
CEAG01051888
148239
Bacillota
TCT
Arg
>WENV170091954
CEAG01031019
44854
Bacillota
TGA
Ser
>WENV170092252
CEAG01040563
37269
Bacillota
TGA
Ser
>WENV170091767
CEAG01023479
250201
Bacillota
TGC
Ala
>WENV170091910
CEAG01029187
235150
Bacillota
TGC
Ala
>WENV170091530
CEAG01014583
235150
Bacillota
TGC
Ala
>WENV170091493
CEAG01012346
235150
Bacillota
TGC
Ala
>WENV170091229
CEAG01004186
299139
Bacillota
TGC
Ala
>WENV170091756
CEAG01022916
274189
Bacillota
TGT
Thr
>WENV170091896
CEAG01028279
338129
Bacillota
TGT
Thr
>WENV170091617
CEAG01017967
338128
Bacillota
TTC
Glu
>WENV170091204
CEAG01003275
411549
Bacillota
TTG
Gln
>WENV170091461
CEAG01011333
338127
Bacillota
TTG
Gln
>WENV170092060
CEAG01034055
235114
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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