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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170091714
CEAG01020769
510477
Bacillota
TCC
Gly
>WENV170092008
CEAG01032427
510477
Bacillota
TCC
Gly
>WENV170091699
CEAG01020265
343590
Bacillota
GCC
Gly
>WENV170091700
CEAG01020265
343590
Bacillota
GCC
Gly
>WENV170091493
CEAG01012346
280500
Bacillota
TGC
Ala
>WENV170091530
CEAG01014583
280500
Bacillota
TGC
Ala
>WENV170091910
CEAG01029187
280500
Bacillota
TGC
Ala
>WENV170091337
CEAG01007643
349107
Bacillota
GCC
Gly
>WENV170091588
CEAG01016788
349107
Bacillota
GCC
Gly
>WENV170092018
CEAG01032958
349107
Bacillota
GCC
Gly
>WENV170091795
CEAG01024512
280428
Bacillota
GAA
Phe
>WENV170092565
CEAG01051888
229015
Bacillota
GTG
His
>WENV170092550
CEAG01051483
179917
Bacillota
CAT
Met
>WENV170092818
CEAG01060281
179917
Bacillota
CAT
Met
>WENV170092551
CEAG01051483
302145
Bacillota
GAA
Phe
>WENV170091589
CEAG01016788
280466
Bacillota
TAC
Val
>WENV170092685
CEAG01055051
175842
Bacillota
CAC
Val
>WENV170092478
CEAG01048656
291629
Bacillota
CCA
Trp
>WENV170091906
CEAG01029143
236579
Bacillota
GAT
Ile
>WENV170091975
CEAG01031528
236579
Bacillota
GAT
Ile
>WENV170091802
CEAG01024876
352588
Bacillota
CAT
Met
>WENV170091905
CEAG01029143
295166
Bacillota
TGC
Ala
>WENV170091616
CEAG01017967
190476
Bacillota
CAT
Met
>WENV170091293
CEAG01006189
73664
Bacillota
CAG
Leu
>WENV170091614
CEAG01017849
73664
Bacillota
CAG
Leu
>WENV170092464
CEAG01047835
73664
Bacillota
CAG
Leu
>WENV170092095
CEAG01034944
280447
Bacillota
GAC
Val
>WENV170092205
CEAG01039572
280447
Bacillota
GAC
Val
>WENV170091955
CEAG01031019
5692
Bacillota
GCT
Ser
>WENV170091283
CEAG01005654
312274
Bacillota
GGC
Ala
>WENV170092392
CEAG01045386
186123
Bacillota
GTC
Asp
>WENV170092476
CEAG01048656
186123
Bacillota
GTC
Asp
>WENV170092479
CEAG01048656
186123
Bacillota
GTC
Asp
>WENV170091793
CEAG01024512
280427
Bacillota
TAC
Val
>WENV170091633
CEAG01018359
284723
Bacillota
TAC
Val
>WENV170092815
CEAG01060281
284723
Bacillota
TAC
Val
>WENV170092049
CEAG01034015
73009
Bacillota
CAG
Leu
>WENV170092163
CEAG01037903
291581
Bacillota
CGG
Pro
>WENV170092177
CEAG01038621
175859
Bacillota
TCT
Arg
>WENV170092078
CEAG01034507
175847
Bacillota
GTC
Asp
>WENV170092365
CEAG01044435
290325
Bacillota
GCC
Gly
>WENV170092774
CEAG01058749
290325
Bacillota
GCC
Gly
>WENV170091143
CEAG01000466
175831
Bacillota
ACG
Arg
>WENV170092148
CEAG01036914
332181
Bacillota
TGT
Thr
>WENV170092084
CEAG01034507
179810
Bacillota
TCT
Arg
>WENV170092564
CEAG01051888
179810
Bacillota
TCT
Arg
>WENV170091874
CEAG01027266
284627
Bacillota
GAA
Phe
>WENV170092303
CEAG01043026
284627
Bacillota
GAA
Phe
>WENV170092393
CEAG01045386
291634
Bacillota
GAA
Phe
>WENV170092480
CEAG01048656
291634
Bacillota
GAA
Phe
>WENV170092232
CEAG01040073
346451
Bacillota
TTT
Lys
>WENV170092394
CEAG01045386
346451
Bacillota
TTT
Lys
>WENV170092162
CEAG01037903
480322
Bacillota
CTG
Gln
>WENV170092770
CEAG01058719
480322
Bacillota
CTG
Gln
>WENV170091371
CEAG01008580
175868
Bacillota
GTT
Asn
>WENV170092113
CEAG01035826
175868
Bacillota
GTT
Asn
>WENV170092156
CEAG01037226
175868
Bacillota
GTT
Asn
>WENV170092317
CEAG01043420
175868
Bacillota
GTT
Asn
>WENV170091441
CEAG01010909
398854
Bacillota
CTC
Glu
>WENV170092643
CEAG01053650
291576
Bacillota
CCC
Gly
>WENV170091204
CEAG01003275
480324
Bacillota
TTG
Gln
>WENV170091318
CEAG01006916
497729
Bacillota
CCA
Trp
>WENV170091834
CEAG01025919
497729
Bacillota
CCA
Trp
>WENV170091969
CEAG01031108
497729
Bacillota
CCA
Trp
>WENV170092603
CEAG01052475
497729
Bacillota
CCA
Trp
>WENV170092688
CEAG01055388
497729
Bacillota
CCA
Trp
>WENV170091156
CEAG01000901
303718
Bacillota
TGT
Thr
>WENV170092180
CEAG01038709
56079
Bacillota
AAG
Leu
>WENV170092463
CEAG01047835
56079
Bacillota
AAG
Leu
>WENV170091767
CEAG01023479
332891
Bacillota
TGC
Ala
>WENV170091597
CEAG01017296
186051
Bacillota
GAT
Ile
>WENV170092655
CEAG01053968
117745
Bacillota
GTA
Tyr
>WENV170091253
CEAG01004680
280444
Bacillota
GGT
Thr
>WENV170092400
CEAG01045840
280444
Bacillota
GGT
Thr
>WENV170091869
CEAG01027266
483485
Bacillota
CCC
Gly
>WENV170092700
CEAG01055925
342104
Bacillota
TAC
Val
>WENV170091617
CEAG01017967
398832
Bacillota
TTC
Glu
>WENV170091872
CEAG01027266
118669
Bacillota
GTA
Tyr
>WENV170091297
CEAG01006209
118669
Bacillota
GTA
Tyr
>WENV170091488
CEAG01011884
280462
Bacillota
GAA
Phe
>WENV170091722
CEAG01021227
280462
Bacillota
GAA
Phe
>WENV170091269
CEAG01005168
398852
Bacillota
CTC
Glu
>WENV170091876
CEAG01027267
398852
Bacillota
CTC
Glu
>WENV170092656
CEAG01053968
398852
Bacillota
CTC
Glu
>WENV170092151
CEAG01036914
289123
Bacillota
GGT
Thr
>WENV170091627
CEAG01018347
175857
Bacillota
GTG
His
>WENV170092058
CEAG01034055
175857
Bacillota
GTG
His
>WENV170092085
CEAG01034507
175857
Bacillota
GTG
His
>WENV170091896
CEAG01028279
398833
Bacillota
TGT
Thr
>WENV170091338
CEAG01007643
175849
Bacillota
GTC
Asp
>WENV170091590
CEAG01016788
175849
Bacillota
GTC
Asp
>WENV170092399
CEAG01045840
175849
Bacillota
GTC
Asp
>WENV170092060
CEAG01034055
280463
Bacillota
TTT
Lys
>WENV170092182
CEAG01038716
405393
Bacillota
GCC
Gly
>WENV170092477
CEAG01048656
405393
Bacillota
GCC
Gly
>WENV170092481
CEAG01048656
405393
Bacillota
GCC
Gly
>WENV170091954
CEAG01031019
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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