This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
74 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170092861
CEAH01001882
175868
Bacillota
GTT
Asn
>WENV170092860
CEAH01001882
398854
Bacillota
CTC
Glu
>WENV170092862
CEAH01001940
321753
Bacillota
GCC
Gly
>WENV170092888
CEAH01002758
236579
Bacillota
GAT
Ile
>WENV170092910
CEAH01003125
284723
Bacillota
TAC
Val
>WENV170092911
CEAH01003432
294275
Bacillota
TGC
Ala
>WENV170093023
CEAH01008218
480322
Bacillota
CTG
Gln
>WENV170093043
CEAH01009250
346451
Bacillota
TTT
Lys
>WENV170093067
CEAH01010333
175868
Bacillota
GTT
Asn
>WENV170093071
CEAH01010395
290325
Bacillota
GCC
Gly
>WENV170093081
CEAH01010988
186051
Bacillota
GAT
Ile
>WENV170093161
CEAH01014058
179917
Bacillota
CAT
Met
>WENV170093158
CEAH01014058
284723
Bacillota
TAC
Val
>WENV170093198
CEAH01015438
349107
Bacillota
GCC
Gly
>WENV170093202
CEAH01015779
480322
Bacillota
CTG
Gln
>WENV170093210
CEAH01016030
229015
Bacillota
GTG
His
>WENV170093209
CEAH01016030
179810
Bacillota
TCT
Arg
>WENV170093334
CEAH01021372
303718
Bacillota
TGT
Thr
>WENV170093366
CEAH01023003
179755
Bacillota
CCG
Arg
>WENV170093415
CEAH01024691
56074
Bacillota
TGA
Ser
>WENV170093423
CEAH01024984
236579
Bacillota
GAT
Ile
>WENV170093422
CEAH01024984
295166
Bacillota
TGC
Ala
>WENV170093442
CEAH01025438
405363
Bacillota
GCA
Cys
>WENV170093443
CEAH01025535
175868
Bacillota
GTT
Asn
>WENV170093512
CEAH01028538
398833
Bacillota
TGT
Thr
>WENV170093563
CEAH01031125
497729
Bacillota
CCA
Trp
>WENV170093614
CEAH01032349
189473
Bacillota
GAT
Ile
>WENV170093674
CEAH01034196
175842
Bacillota
CAC
Val
>WENV170093713
CEAH01036290
280444
Bacillota
GGT
Thr
>WENV170093712
CEAH01036290
175849
Bacillota
GTC
Asp
>WENV170093716
CEAH01036748
280444
Bacillota
GGT
Thr
>WENV170093715
CEAH01036748
175849
Bacillota
GTC
Asp
>WENV170093732
CEAH01037378
346451
Bacillota
TTT
Lys
>WENV170093751
CEAH01038487
73009
Bacillota
CAG
Leu
>WENV170093754
CEAH01038569
342104
Bacillota
TAC
Val
>WENV170093783
CEAH01040275
348419
Bacillota
GTT
Asn
>WENV170093833
CEAH01041395
179917
Bacillota
CAT
Met
>WENV170093834
CEAH01041395
302145
Bacillota
GAA
Phe
>WENV170093835
CEAH01041414
343590
Bacillota
GCC
Gly
>WENV170093864
CEAH01042681
480322
Bacillota
CTG
Gln
>WENV170093871
CEAH01043062
480324
Bacillota
TTG
Gln
>WENV170093889
CEAH01044279
234991
Bacillota
GAT
Ile
>WENV170093890
CEAH01044279
291650
Bacillota
TGC
Ala
>WENV170093899
CEAH01044861
480322
Bacillota
CTG
Gln
>WENV170093922
CEAH01045471
186123
Bacillota
GTC
Asp
>WENV170093923
CEAH01045471
291634
Bacillota
GAA
Phe
>WENV170093956
CEAH01046731
312274
Bacillota
GGC
Ala
>WENV170094002
CEAH01050432
480324
Bacillota
TTG
Gln
>WENV170094006
CEAH01051368
323864
Bacillota
TGC
Ala
>WENV170094035
CEAH01052665
73009
Bacillota
CAG
Leu
>WENV170094045
CEAH01053219
398832
Bacillota
TTC
Glu
>WENV170094143
CEAH01058520
303718
Bacillota
TGT
Thr
>WENV170094186
CEAH01060770
291629
Bacillota
CCA
Trp
>WENV170094184
CEAH01060770
186123
Bacillota
GTC
Asp
>WENV170094185
CEAH01060770
405393
Bacillota
GCC
Gly
>WENV170094222
CEAH01061231
280473
Bacillota
TGG
Pro
>WENV170094253
CEAH01062884
353153
Bacillota
TGC
Ala
>WENV170094258
CEAH01062924
342104
Bacillota
TAC
Val
>WENV170094267
CEAH01063512
332181
Bacillota
TGT
Thr
>WENV170094270
CEAH01063512
289123
Bacillota
GGT
Thr
>WENV170094281
CEAH01064069
284723
Bacillota
TAC
Val
>WENV170094302
CEAH01064709
349107
Bacillota
GCC
Gly
>WENV170094318
CEAH01065156
405393
Bacillota
GCC
Gly
>WENV170094324
CEAH01065358
284723
Bacillota
TAC
Val
>WENV170094326
CEAH01065358
284723
Bacillota
TAC
Val
>WENV170094336
CEAH01065781
291581
Bacillota
CGG
Pro
>WENV170094366
CEAH01067169
175857
Bacillota
GTG
His
>WENV170094376
CEAH01067180
179917
Bacillota
CAT
Met
>WENV170094415
CEAH01068821
343590
Bacillota
GCC
Gly
>WENV170094416
CEAH01068891
280500
Bacillota
TGC
Ala
>WENV170094428
CEAH01069405
398833
Bacillota
TGT
Thr
>WENV170094458
CEAH01070545
175842
Bacillota
CAC
Val
>WENV170094486
CEAH01072413
284627
Bacillota
GAA
Phe
>WENV170094498
CEAH01073194
349107
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK