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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170103645
CEAZ01000980
307003
Bacillota
TGC
Ala
>WENV170103656
CEAZ01001348
235171
Bacillota
CCA
Trp
>WENV170103657
CEAZ01001348
196621
Bacillota
GTC
Asp
>WENV170103658
CEAZ01001510
235142
Bacillota
CTT
Lys
>WENV170103692
CEAZ01002554
411549
Bacillota
TTG
Gln
>WENV170103706
CEAZ01003338
429429
Bacillota
CCA
Trp
>WENV170103721
CEAZ01004594
245296
Bacillota
CCC
Gly
>WENV170103839
CEAZ01008732
277200
Bacillota
GGC
Ala
>WENV170103872
CEAZ01010331
238910
Bacillota
CTT
Lys
>WENV170103887
CEAZ01011088
80612
Bacillota
GTA
Tyr
>WENV170103900
CEAZ01011403
148188
Bacillota
CCG
Arg
>WENV170104001
CEAZ01016263
163943
Bacillota
GTC
Asp
>WENV170104035
CEAZ01017805
144652
Bacillota
GTC
Asp
>WENV170104043
CEAZ01018011
411549
Bacillota
TTG
Gln
>WENV170104055
CEAZ01018393
163943
Bacillota
GTC
Asp
>WENV170104106
CEAZ01021110
235113
Bacillota
GAA
Phe
>WENV170104113
CEAZ01021118
338147
Bacillota
CTC
Glu
>WENV170104123
CEAZ01021762
144612
Bacillota
TCT
Arg
>WENV170104243
CEAZ01026131
238910
Bacillota
CTT
Lys
>WENV170104263
CEAZ01027142
344240
Bacillota
GCC
Gly
>WENV170104271
CEAZ01027632
163943
Bacillota
GTC
Asp
>WENV170104284
CEAZ01028069
41154
Bacillota
TAA
Leu
>WENV170104324
CEAZ01028771
196632
Bacillota
GTC
Asp
>WENV170104325
CEAZ01028771
344240
Bacillota
GCC
Gly
>WENV170104356
CEAZ01029822
44859
Bacillota
AAG
Leu
>WENV170104357
CEAZ01029822
44859
Bacillota
AAG
Leu
>WENV170104358
CEAZ01029822
59312
Bacillota
CAG
Leu
>WENV170104372
CEAZ01030519
144612
Bacillota
TCT
Arg
>WENV170104405
CEAZ01032093
235095
Bacillota
GGT
Thr
>WENV170104424
CEAZ01032391
235114
Bacillota
TTT
Lys
>WENV170104427
CEAZ01032784
144594
Bacillota
CAC
Val
>WENV170104434
CEAZ01032979
298620
Bacillota
CAT
Met
>WENV170104473
CEAZ01035049
144621
Bacillota
GTT
Asn
>WENV170104494
CEAZ01035642
338147
Bacillota
CTC
Glu
>WENV170104504
CEAZ01036109
298639
Bacillota
GTT
Asn
>WENV170104533
CEAZ01037273
338128
Bacillota
TTC
Glu
>WENV170104621
CEAZ01041609
344240
Bacillota
GCC
Gly
>WENV170104627
CEAZ01041662
248965
Bacillota
GCC
Gly
>WENV170104643
CEAZ01042350
196632
Bacillota
GTC
Asp
>WENV170104644
CEAZ01042350
245344
Bacillota
GAA
Phe
>WENV170104645
CEAZ01042350
344240
Bacillota
GCC
Gly
>WENV170104646
CEAZ01042350
419639
Bacillota
GCA
Cys
>WENV170104686
CEAZ01044417
235142
Bacillota
CTT
Lys
>WENV170104767
CEAZ01046826
144594
Bacillota
CAC
Val
>WENV170104789
CEAZ01048228
299139
Bacillota
TGC
Ala
>WENV170104830
CEAZ01049896
338147
Bacillota
CTC
Glu
>WENV170104883
CEAZ01051921
155958
Bacillota
GAT
Ile
>WENV170104912
CEAZ01053264
338128
Bacillota
TTC
Glu
>WENV170104956
CEAZ01056319
247734
Bacillota
TGC
Ala
>WENV170104987
CEAZ01057659
411549
Bacillota
TTG
Gln
>WENV170104988
CEAZ01057873
307003
Bacillota
TGC
Ala
>WENV170105003
CEAZ01058456
235124
Bacillota
TGG
Pro
>WENV170105016
CEAZ01058908
235098
Bacillota
GAC
Val
>WENV170105040
CEAZ01059334
148188
Bacillota
CCG
Arg
>WENV170105053
CEAZ01059863
272992
Bacillota
CTT
Lys
>WENV170105072
CEAZ01060378
196632
Bacillota
GTC
Asp
>WENV170105073
CEAZ01060378
245344
Bacillota
GAA
Phe
>WENV170105165
CEAZ01064480
412387
Bacillota
GCA
Cys
>WENV170105185
CEAZ01065017
144610
Bacillota
GTG
His
>WENV170105192
CEAZ01065591
144612
Bacillota
TCT
Arg
>WENV170105205
CEAZ01066005
144621
Bacillota
GTT
Asn
>WENV170105212
CEAZ01066107
95563
Bacillota
GTA
Tyr
>WENV170105230
CEAZ01066656
235113
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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