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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180137121
OATO01000342
24650
Bacillota
TAA
Leu
>WENV180137363
OATO01010645
361659
Bacillota
GCC
Gly
>WENV180137317
OATO01006033
202812
Bacillota
CAT
Met
>WENV180137360
OATO01010645
347350
Bacillota
TTG
Gln
>WENV180137503
OATO01055534
194265
Bacillota
CAT
Met
>WENV180137260
OATO01002752
144612
Bacillota
TCT
Arg
>WENV180137402
OATO01016953
267649
Bacillota
TAC
Val
>WENV180136921
OATO01000018
267649
Bacillota
TAC
Val
>WENV180136919
OATO01000018
267649
Bacillota
TAC
Val
>WENV180137341
OATO01008576
339890
Bacillota
TTG
Gln
>WENV180137336
OATO01008198
338544
Bacillota
TGT
Thr
>WENV180137393
OATO01015617
429443
Bacillota
GCA
Cys
>WENV180137213
OATO01001712
246023
Bacillota
TGC
Ala
>WENV180137464
OATO01034271
239201
Bacillota
GAA
Phe
>WENV180137362
OATO01010645
114359
Bacillota
TAG
Leu
>WENV180137420
OATO01019769
235137
Bacillota
TGC
Ala
>WENV180137477
OATO01039880
391536
Bacillota
TTC
Glu
>WENV180137155
OATO01000515
338143
Bacillota
CTC
Glu
>WENV180137428
OATO01023014
147758
Bacillota
CGG
Pro
>WENV180137215
OATO01001712
341763
Bacillota
CTC
Glu
>WENV180137401
OATO01016953
144668
Bacillota
GTC
Asp
>WENV180137119
OATO01000342
144668
Bacillota
GTC
Asp
>WENV180137191
OATO01000974
429429
Bacillota
CCA
Trp
>WENV180137406
OATO01016953
313454
Bacillota
GAA
Phe
>WENV180137335
OATO01008198
186380
Bacillota
GTC
Asp
>WENV180137272
OATO01003104
235117
Bacillota
TAC
Val
>WENV180137274
OATO01003104
235079
Bacillota
GAA
Phe
>WENV180137481
OATO01040463
339935
Bacillota
GTT
Asn
>WENV180137377
OATO01013759
279677
Bacillota
GGC
Ala
>WENV180137478
OATO01039880
243612
Bacillota
TAC
Val
>WENV180137454
OATO01033890
316443
Bacillota
GTC
Asp
>WENV180137271
OATO01003104
271471
Bacillota
GCC
Gly
>WENV180137179
OATO01000797
258936
Bacillota
GGT
Thr
>WENV180137484
OATO01041078
413152
Bacillota
TCC
Gly
>WENV180137429
OATO01023476
390525
Bacillota
TTC
Glu
>WENV180137212
OATO01001712
201704
Bacillota
GAT
Ile
>WENV180137334
OATO01008198
312468
Bacillota
TAC
Val
>WENV180137407
OATO01016953
313164
Bacillota
TTT
Lys
>WENV180137144
OATO01000405
313164
Bacillota
TTT
Lys
>WENV180137456
OATO01033890
109476
Bacillota
TAG
Leu
>WENV180137444
OATO01028582
238745
Bacillota
CTT
Lys
>WENV180137060
OATO01000160
18852
Bacillota
GCT
Ser
>WENV180137489
OATO01044580
194150
Bacillota
TGG
Pro
>WENV180137365
OATO01010645
150597
Bacillota
TCT
Arg
>WENV180137357
OATO01010645
150597
Bacillota
TCT
Arg
>WENV180137294
OATO01004196
59296
Bacillota
AAG
Leu
>WENV180137479
OATO01039880
368876
Bacillota
GCC
Gly
>WENV180137141
OATO01000405
147674
Bacillota
TCT
Arg
>WENV180137359
OATO01010645
235905
Bacillota
GTG
His
>WENV180137364
OATO01010645
411739
Bacillota
TCC
Gly
>WENV180137356
OATO01010645
411739
Bacillota
TCC
Gly
>WENV180137381
OATO01014183
235506
Bacillota
TGC
Ala
>WENV180137289
OATO01004025
199936
Bacillota
GAT
Ile
>WENV180137430
OATO01023476
258820
Bacillota
CGT
Thr
>WENV180137376
OATO01013759
238493
Bacillota
CGC
Ala
>WENV180137465
OATO01034271
113740
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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