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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
206 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180141363
OATU01008023
37528
Bacillota
AAG
Leu
>WENV180140468
OATU01000056
24650
Bacillota
TAA
Leu
>WENV180141133
OATU01002907
24650
Bacillota
TAA
Leu
>WENV180141180
OATU01003732
24650
Bacillota
TAA
Leu
>WENV180141110
OATU01002624
243647
Bacillota
TTT
Lys
>WENV180141153
OATU01003164
243647
Bacillota
TTT
Lys
>WENV180141298
OATU01006350
243647
Bacillota
TTT
Lys
>WENV180141096
OATU01002493
16842
Bacillota
CGA
Ser
>WENV180141107
OATU01002619
16842
Bacillota
CGA
Ser
>WENV180140496
OATU01000078
283807
Bacillota
TAC
Val
>WENV180141551
OATU01023502
283807
Bacillota
TAC
Val
>WENV180140637
OATU01000267
37213
Bacillota
TGA
Ser
>WENV180141027
OATU01001792
37213
Bacillota
TGA
Ser
>WENV180141029
OATU01001794
154063
Bacillota
CGG
Pro
>WENV180140884
OATU01000964
154063
Bacillota
CGG
Pro
>WENV180140763
OATU01000589
154063
Bacillota
CGG
Pro
>WENV180140685
OATU01000351
154063
Bacillota
CGG
Pro
>WENV180141345
OATU01007582
267649
Bacillota
TAC
Val
>WENV180141257
OATU01005017
267649
Bacillota
TAC
Val
>WENV180141248
OATU01004940
267649
Bacillota
TAC
Val
>WENV180140984
OATU01001502
267649
Bacillota
TAC
Val
>WENV180140668
OATU01000324
267649
Bacillota
TAC
Val
>WENV180140452
OATU01000048
267649
Bacillota
TAC
Val
>WENV180140377
OATU01000007
267649
Bacillota
TAC
Val
>WENV180140375
OATU01000007
267649
Bacillota
TAC
Val
>WENV180140918
OATU01001096
267556
Bacillota
TAC
Val
>WENV180140525
OATU01000106
267556
Bacillota
TAC
Val
>WENV180140363
OATU01000003
339890
Bacillota
TTG
Gln
>WENV180141489
OATU01015012
338152
Bacillota
TTC
Glu
>WENV180141355
OATU01007778
23769
Bacillota
TAA
Leu
>WENV180140939
OATU01001183
23769
Bacillota
TAA
Leu
>WENV180140561
OATU01000149
23769
Bacillota
TAA
Leu
>WENV180140497
OATU01000078
23769
Bacillota
TAA
Leu
>WENV180140489
OATU01000071
23769
Bacillota
TAA
Leu
>WENV180141477
OATU01013087
235154
Bacillota
GTT
Asn
>WENV180141278
OATU01005765
235154
Bacillota
GTT
Asn
>WENV180141188
OATU01003737
235154
Bacillota
GTT
Asn
>WENV180141064
OATU01002116
235154
Bacillota
GTT
Asn
>WENV180140976
OATU01001449
235154
Bacillota
GTT
Asn
>WENV180140952
OATU01001307
235154
Bacillota
GTT
Asn
>WENV180141483
OATU01013954
241441
Bacillota
GCC
Gly
>WENV180141510
OATU01017505
80951
Bacillota
CAG
Leu
>WENV180141481
OATU01013912
429443
Bacillota
GCA
Cys
>WENV180141446
OATU01011171
429443
Bacillota
GCA
Cys
>WENV180141066
OATU01002116
429443
Bacillota
GCA
Cys
>WENV180141369
OATU01008216
246023
Bacillota
TGC
Ala
>WENV180140367
OATU01000004
59312
Bacillota
CAG
Leu
>WENV180141286
OATU01006100
238910
Bacillota
CTT
Lys
>WENV180140357
OATU01000002
338147
Bacillota
CTC
Glu
>WENV180140356
OATU01000002
338147
Bacillota
CTC
Glu
>WENV180140355
OATU01000002
338147
Bacillota
CTC
Glu
>WENV180141699
OATU01066812
235150
Bacillota
TGC
Ala
>WENV180141726
OATU01084075
114359
Bacillota
TAG
Leu
>WENV180141687
OATU01055908
235137
Bacillota
TGC
Ala
>WENV180141626
OATU01034941
235137
Bacillota
TGC
Ala
>WENV180141492
OATU01015217
235137
Bacillota
TGC
Ala
>WENV180141467
OATU01012059
235137
Bacillota
TGC
Ala
>WENV180141737
OATU01086089
235294
Bacillota
TGC
Ala
>WENV180141499
OATU01015671
340802
Bacillota
TTG
Gln
>WENV180140434
OATU01000032
340802
Bacillota
TTG
Gln
>WENV180140785
OATU01000638
293599
Bacillota
CTT
Lys
>WENV180141741
OATU01086195
338143
Bacillota
CTC
Glu
>WENV180141683
OATU01053826
338143
Bacillota
CTC
Glu
>WENV180141061
OATU01002051
338143
Bacillota
CTC
Glu
>WENV180140781
OATU01000629
338143
Bacillota
CTC
Glu
>WENV180140658
OATU01000308
338143
Bacillota
CTC
Glu
>WENV180140657
OATU01000308
338143
Bacillota
CTC
Glu
>WENV180141513
OATU01017660
341763
Bacillota
CTC
Glu
>WENV180141735
OATU01085967
144668
Bacillota
GTC
Asp
>WENV180141585
OATU01029600
429429
Bacillota
CCA
Trp
>WENV180141526
OATU01020813
429429
Bacillota
CCA
Trp
>WENV180140684
OATU01000346
429429
Bacillota
CCA
Trp
>WENV180140547
OATU01000133
429429
Bacillota
CCA
Trp
>WENV180141055
OATU01002004
41154
Bacillota
TAA
Leu
>WENV180140533
OATU01000108
41154
Bacillota
TAA
Leu
>WENV180141171
OATU01003593
16834
Bacillota
GCT
Ser
>WENV180141485
OATU01014029
16834
Bacillota
GCT
Ser
>WENV180141407
OATU01009929
16834
Bacillota
GCT
Ser
>WENV180141707
OATU01077202
152125
Bacillota
GTT
Asn
>WENV180141232
OATU01004360
243646
Bacillota
GTT
Asn
>WENV180141114
OATU01002624
243646
Bacillota
GTT
Asn
>WENV180141109
OATU01002624
243646
Bacillota
GTT
Asn
>WENV180141021
OATU01001779
243646
Bacillota
GTT
Asn
>WENV180141458
OATU01011852
114002
Bacillota
CAA
Leu
>WENV180141725
OATU01084032
37437
Bacillota
TAA
Leu
>WENV180140900
OATU01000993
37437
Bacillota
TAA
Leu
>WENV180141302
OATU01006350
296878
Bacillota
GTT
Asn
>WENV180141297
OATU01006350
296878
Bacillota
GTT
Asn
>WENV180140682
OATU01000346
295714
Bacillota
GCC
Gly
>WENV180140680
OATU01000346
295714
Bacillota
GCC
Gly
>WENV180140656
OATU01000303
295714
Bacillota
GCC
Gly
>WENV180140655
OATU01000303
295714
Bacillota
GCC
Gly
>WENV180140585
OATU01000184
295714
Bacillota
GCC
Gly
>WENV180140522
OATU01000102
295714
Bacillota
GCC
Gly
>WENV180140512
OATU01000091
295714
Bacillota
GCC
Gly
>WENV180140393
OATU01000019
295714
Bacillota
GCC
Gly
>WENV180141581
OATU01028550
162028
Bacillota
ACG
Arg
>WENV180141268
OATU01005428
238189
Bacillota
CCT
Arg
>WENV180141534
OATU01021862
243612
Bacillota
TAC
Val
>WENV180141300
OATU01006350
243612
Bacillota
TAC
Val
>WENV180141234
OATU01004360
243612
Bacillota
TAC
Val
>WENV180141112
OATU01002624
243612
Bacillota
TAC
Val
>WENV180141023
OATU01001779
243612
Bacillota
TAC
Val
>WENV180140962
OATU01001359
149041
Bacillota
GTC
Asp
>WENV180140903
OATU01001016
149041
Bacillota
GTC
Asp
>WENV180140888
OATU01000978
149041
Bacillota
GTC
Asp
>WENV180140553
OATU01000148
149041
Bacillota
GTC
Asp
>WENV180141544
OATU01023502
144766
Bacillota
CAT
Met
>WENV180141674
OATU01052846
37269
Bacillota
TGA
Ser
>WENV180141539
OATU01023239
37269
Bacillota
TGA
Ser
>WENV180141325
OATU01006854
37269
Bacillota
TGA
Ser
>WENV180141289
OATU01006157
37269
Bacillota
TGA
Ser
>WENV180141086
OATU01002362
37269
Bacillota
TGA
Ser
>WENV180141249
OATU01004940
155089
Bacillota
CAT
Met
>WENV180140669
OATU01000324
155089
Bacillota
CAT
Met
>WENV180141488
OATU01015012
287000
Bacillota
GTT
Asn
>WENV180141712
OATU01083599
169968
Bacillota
CAT
Met
>WENV180140974
OATU01001414
169968
Bacillota
CAT
Met
>WENV180141448
OATU01011436
413152
Bacillota
TCC
Gly
>WENV180140476
OATU01000061
162445
Bacillota
CAT
Met
>WENV180140474
OATU01000061
162445
Bacillota
CAT
Met
>WENV180140704
OATU01000372
152492
Bacillota
GGG
Pro
>WENV180141470
OATU01012532
147135
Bacillota
ACG
Arg
>WENV180140455
OATU01000050
100326
Bacillota
GTA
Tyr
>WENV180140406
OATU01000025
100326
Bacillota
GTA
Tyr
>WENV180140861
OATU01000888
144610
Bacillota
GTG
His
>WENV180140433
OATU01000032
144610
Bacillota
GTG
His
>WENV180140937
OATU01001183
147684
Bacillota
ACG
Arg
>WENV180140632
OATU01000258
147684
Bacillota
ACG
Arg
>WENV180141198
OATU01003880
342895
Bacillota
CAT
Met
>WENV180141196
OATU01003854
342895
Bacillota
CAT
Met
>WENV180141326
OATU01006854
10680
Bacillota
GGA
Ser
>WENV180141028
OATU01001792
10680
Bacillota
GGA
Ser
>WENV180140583
OATU01000178
10680
Bacillota
GGA
Ser
>WENV180141742
OATU01086231
412387
Bacillota
GCA
Cys
>WENV180141677
OATU01053208
411584
Bacillota
TCC
Gly
>WENV180141154
OATU01003206
18852
Bacillota
GCT
Ser
>WENV180140943
OATU01001208
18852
Bacillota
GCT
Ser
>WENV180140826
OATU01000754
18852
Bacillota
GCT
Ser
>WENV180140819
OATU01000710
18852
Bacillota
GCT
Ser
>WENV180140616
OATU01000225
18852
Bacillota
GCT
Ser
>WENV180140472
OATU01000059
18852
Bacillota
GCT
Ser
>WENV180141657
OATU01048709
194150
Bacillota
TGG
Pro
>WENV180140960
OATU01001359
239832
Bacillota
TGT
Thr
>WENV180140555
OATU01000148
239832
Bacillota
TGT
Thr
>WENV180141651
OATU01046427
198159
Bacillota
CAT
Met
>WENV180141358
OATU01007939
150597
Bacillota
TCT
Arg
>WENV180141721
OATU01083849
250349
Bacillota
GAA
Phe
>WENV180140897
OATU01000993
250349
Bacillota
GAA
Phe
>WENV180141051
OATU01001970
198250
Bacillota
CAT
Met
>WENV180141580
OATU01028550
37193
Bacillota
TAA
Leu
>WENV180141374
OATU01008301
238188
Bacillota
CGT
Thr
>WENV180141691
OATU01058195
147717
Bacillota
TGG
Pro
>WENV180141654
OATU01047998
235701
Bacillota
TTT
Lys
>WENV180140949
OATU01001261
59296
Bacillota
AAG
Leu
>WENV180140784
OATU01000633
59296
Bacillota
AAG
Leu
>WENV180140755
OATU01000526
59296
Bacillota
AAG
Leu
>WENV180140753
OATU01000526
59296
Bacillota
AAG
Leu
>WENV180140574
OATU01000159
59296
Bacillota
AAG
Leu
>WENV180141014
OATU01001683
235127
Bacillota
TTT
Lys
>WENV180141716
OATU01083725
235197
Bacillota
GTC
Asp
>WENV180140896
OATU01000993
235197
Bacillota
GTC
Asp
>WENV180141301
OATU01006350
368876
Bacillota
GCC
Gly
>WENV180141296
OATU01006350
368876
Bacillota
GCC
Gly
>WENV180141113
OATU01002624
368876
Bacillota
GCC
Gly
>WENV180141108
OATU01002624
368876
Bacillota
GCC
Gly
>WENV180140898
OATU01000993
368876
Bacillota
GCC
Gly
>WENV180141011
OATU01001683
147674
Bacillota
TCT
Arg
>WENV180141240
OATU01004577
238187
Bacillota
GGT
Thr
>WENV180141357
OATU01007939
411739
Bacillota
TCC
Gly
>WENV180141652
OATU01046427
235506
Bacillota
TGC
Ala
>WENV180141546
OATU01023502
163753
Bacillota
TGG
Pro
>WENV180141340
OATU01007487
23699
Bacillota
CGA
Ser
>WENV180141361
OATU01007939
237963
Bacillota
TTT
Lys
>WENV180141359
OATU01007939
279635
Bacillota
GTG
His
>WENV180141151
OATU01003164
243613
Bacillota
GTG
His
>WENV180141679
OATU01053621
144672
Bacillota
TCT
Arg
>WENV180141497
OATU01015671
144672
Bacillota
TCT
Arg
>WENV180140931
OATU01001154
144672
Bacillota
TCT
Arg
>WENV180140696
OATU01000355
144672
Bacillota
TCT
Arg
>WENV180140625
OATU01000238
144672
Bacillota
TCT
Arg
>WENV180141057
OATU01002026
144652
Bacillota
GTC
Asp
>WENV180140403
OATU01000025
144652
Bacillota
GTC
Asp
>WENV180141231
OATU01004356
419877
Bacillota
TCC
Gly
>WENV180140941
OATU01001203
419877
Bacillota
TCC
Gly
>WENV180141639
OATU01043130
152491
Bacillota
CAT
Met
>WENV180141662
OATU01049561
144762
Bacillota
TCT
Arg
>WENV180141638
OATU01043130
281472
Bacillota
GGT
Thr
>WENV180140432
OATU01000032
157635
Bacillota
TCT
Arg
>WENV180141420
OATU01010320
413657
Bacillota
CCC
Gly
>WENV180141625
OATU01034757
272488
Bacillota
GAA
Phe
>WENV180141518
OATU01018651
272488
Bacillota
GAA
Phe
>WENV180140975
OATU01001414
272488
Bacillota
GAA
Phe
>WENV180140510
OATU01000091
272488
Bacillota
GAA
Phe
>WENV180141577
OATU01028550
146770
Bacillota
TTC
Glu
>WENV180141567
OATU01027020
147496
Bacillota
TCT
Arg
>WENV180141322
OATU01006737
338533
Bacillota
CCT
Arg
>WENV180141584
OATU01029482
273862
Bacillota
TGC
Ala
>WENV180141370
OATU01008253
273862
Bacillota
TGC
Ala
>WENV180141152
OATU01003164
343027
Bacillota
TTG
Gln
>WENV180140948
OATU01001248
338131
Bacillota
GCC
Gly
>WENV180140634
OATU01000259
338131
Bacillota
GCC
Gly
>WENV180140570
OATU01000159
338131
Bacillota
GCC
Gly
>WENV180140505
OATU01000083
338131
Bacillota
GCC
Gly
>WENV180141736
OATU01086063
338207
Bacillota
TTC
Glu
>WENV180141685
OATU01053916
237283
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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