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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180548580
OCIX01005158
73664
Bacillota
CAG
Leu
>WENV180548616
OCIX01010016
179917
Bacillota
CAT
Met
>WENV180548599
OCIX01006914
497729
Bacillota
CCA
Trp
>WENV180548645
OCIX01016023
236579
Bacillota
GAT
Ile
>WENV180548705
OCIX01029119
179563
Bacillota
GAT
Ile
>WENV180548659
OCIX01018974
176017
Bacillota
GAT
Ile
>WENV180548788
OCIX01067106
343590
Bacillota
GCC
Gly
>WENV180548623
OCIX01011460
405393
Bacillota
GCC
Gly
>WENV180548540
OCIX01002206
175847
Bacillota
GTC
Asp
>WENV180548585
OCIX01005245
229015
Bacillota
GTG
His
>WENV180548721
OCIX01036192
175857
Bacillota
GTG
His
>WENV180548542
OCIX01002206
82124
Bacillota
TAA
Leu
>WENV180548638
OCIX01014845
342104
Bacillota
TAC
Val
>WENV180548669
OCIX01019786
52748
Bacillota
TGA
Ser
>WENV180548644
OCIX01016023
353153
Bacillota
TGC
Ala
>WENV180548704
OCIX01029119
353153
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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