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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181142709
OEHI01006536
99852
Bacillota
GTA
Tyr
>WENV181142823
OEHI01032526
280428
Bacillota
GAA
Phe
>WENV181142854
OEHI01049242
280466
Bacillota
TAC
Val
>WENV181142800
OEHI01024833
280492
Bacillota
CTT
Lys
>WENV181142789
OEHI01020486
215243
Bacillota
CAT
Met
>WENV181142779
OEHI01018813
190476
Bacillota
CAT
Met
>WENV181142803
OEHI01026320
280447
Bacillota
GAC
Val
>WENV181142778
OEHI01018001
5692
Bacillota
GCT
Ser
>WENV181142775
OEHI01017409
284723
Bacillota
TAC
Val
>WENV181142827
OEHI01034018
73009
Bacillota
CAG
Leu
>WENV181142731
OEHI01009403
175859
Bacillota
TCT
Arg
>WENV181142719
OEHI01007842
175847
Bacillota
GTC
Asp
>WENV181142797
OEHI01024309
179810
Bacillota
TCT
Arg
>WENV181142724
OEHI01007842
284627
Bacillota
GAA
Phe
>WENV181142627
OEHI01001117
284627
Bacillota
GAA
Phe
>WENV181142744
OEHI01011633
480322
Bacillota
CTG
Gln
>WENV181142788
OEHI01020178
322848
Bacillota
CTT
Lys
>WENV181142787
OEHI01020178
398854
Bacillota
CTC
Glu
>WENV181142848
OEHI01045209
400963
Bacillota
GTT
Asn
>WENV181142793
OEHI01021986
323864
Bacillota
TGC
Ala
>WENV181142660
OEHI01002736
292374
Bacillota
TGC
Ala
>WENV181142838
OEHI01037668
321753
Bacillota
GCC
Gly
>WENV181142834
OEHI01035963
179755
Bacillota
CCG
Arg
>WENV181142780
OEHI01018813
398832
Bacillota
TTC
Glu
>WENV181142722
OEHI01007842
118669
Bacillota
GTA
Tyr
>WENV181142672
OEHI01003558
118669
Bacillota
GTA
Tyr
>WENV181142645
OEHI01001905
118669
Bacillota
GTA
Tyr
>WENV181142694
OEHI01005031
398852
Bacillota
CTC
Glu
>WENV181142659
OEHI01002736
201856
Bacillota
GAT
Ile
>WENV181142798
OEHI01024309
175857
Bacillota
GTG
His
>WENV181142812
OEHI01029760
398833
Bacillota
TGT
Thr
>WENV181142837
OEHI01037668
175849
Bacillota
GTC
Asp
>WENV181142741
OEHI01011438
280486
Bacillota
TGC
Ala
>WENV181142777
OEHI01018001
56074
Bacillota
TGA
Ser
>WENV181142766
OEHI01015061
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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