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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
68 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181491367
OGFY01000006
56079
Bacillota
AAG
Leu
>WENV181491368
OGFY01000006
56079
Bacillota
AAG
Leu
>WENV181492345
OGFY01009419
58120
Bacillota
AAG
Leu
>WENV181491709
OGFY01000494
179176
Bacillota
ACG
Arg
>WENV181492051
OGFY01002550
175831
Bacillota
ACG
Arg
>WENV181491855
OGFY01001054
175842
Bacillota
CAC
Val
>WENV181491369
OGFY01000006
73664
Bacillota
CAG
Leu
>WENV181492010
OGFY01002069
73009
Bacillota
CAG
Leu
>WENV181492056
OGFY01002707
190476
Bacillota
CAT
Met
>WENV181492061
OGFY01002743
291576
Bacillota
CCC
Gly
>WENV181492185
OGFY01004986
179755
Bacillota
CCG
Arg
>WENV181492376
OGFY01010700
291581
Bacillota
CGG
Pro
>WENV181492308
OGFY01008294
398854
Bacillota
CTC
Glu
>WENV181491411
OGFY01000035
398852
Bacillota
CTC
Glu
>WENV181491490
OGFY01000098
398852
Bacillota
CTC
Glu
>WENV181491908
OGFY01001412
398852
Bacillota
CTC
Glu
>WENV181491644
OGFY01000347
284746
Bacillota
CTG
Gln
>WENV181492375
OGFY01010700
480322
Bacillota
CTG
Gln
>WENV181491396
OGFY01000027
280492
Bacillota
CTT
Lys
>WENV181491516
OGFY01000125
280492
Bacillota
CTT
Lys
>WENV181492481
OGFY01016404
322848
Bacillota
CTT
Lys
>WENV181492378
OGFY01010829
280428
Bacillota
GAA
Phe
>WENV181492532
OGFY01020525
291579
Bacillota
GAA
Phe
>WENV181491354
OGFY01000005
284742
Bacillota
GAA
Phe
>WENV181491425
OGFY01000054
280462
Bacillota
GAA
Phe
>WENV181491484
OGFY01000090
280483
Bacillota
GAA
Phe
>WENV181492022
OGFY01002200
280447
Bacillota
GAC
Val
>WENV181492165
OGFY01004667
280447
Bacillota
GAC
Val
>WENV181492721
OGFY01052609
179563
Bacillota
GAT
Ile
>WENV181492562
OGFY01023357
186051
Bacillota
GAT
Ile
>WENV181492365
OGFY01010215
405363
Bacillota
GCA
Cys
>WENV181492379
OGFY01010829
321753
Bacillota
GCC
Gly
>WENV181491485
OGFY01000090
285756
Bacillota
GCC
Gly
>WENV181492457
OGFY01014495
5692
Bacillota
GCT
Ser
>WENV181492493
OGFY01016922
29930
Bacillota
GGA
Ser
>WENV181492768
OGFY01070323
184497
Bacillota
GGG
Pro
>WENV181492144
OGFY01004348
280444
Bacillota
GGT
Thr
>WENV181492147
OGFY01004348
280444
Bacillota
GGT
Thr
>WENV181492438
OGFY01013691
280444
Bacillota
GGT
Thr
>WENV181492094
OGFY01003325
99852
Bacillota
GTA
Tyr
>WENV181492143
OGFY01004347
99852
Bacillota
GTA
Tyr
>WENV181491535
OGFY01000158
117745
Bacillota
GTA
Tyr
>WENV181491470
OGFY01000089
175899
Bacillota
GTC
Asp
>WENV181491353
OGFY01000005
179935
Bacillota
GTC
Asp
>WENV181492146
OGFY01004348
175849
Bacillota
GTC
Asp
>WENV181491477
OGFY01000089
175857
Bacillota
GTG
His
>WENV181491365
OGFY01000005
293309
Bacillota
GTT
Asn
>WENV181492309
OGFY01008294
175868
Bacillota
GTT
Asn
>WENV181491619
OGFY01000281
46835
Bacillota
TAA
Leu
>WENV181492159
OGFY01004505
46835
Bacillota
TAA
Leu
>WENV181492161
OGFY01004505
46835
Bacillota
TAA
Leu
>WENV181491713
OGFY01000510
290391
Bacillota
TAC
Val
>WENV181491553
OGFY01000183
321248
Bacillota
TAC
Val
>WENV181491811
OGFY01000909
321248
Bacillota
TAC
Val
>WENV181491356
OGFY01000005
482449
Bacillota
TCC
Gly
>WENV181491936
OGFY01001591
175859
Bacillota
TCT
Arg
>WENV181491589
OGFY01000240
179810
Bacillota
TCT
Arg
>WENV181492456
OGFY01014495
56074
Bacillota
TGA
Ser
>WENV181492344
OGFY01009406
323864
Bacillota
TGC
Ala
>WENV181492275
OGFY01007344
280473
Bacillota
TGG
Pro
>WENV181492373
OGFY01010572
280473
Bacillota
TGG
Pro
>WENV181492117
OGFY01003789
398833
Bacillota
TGT
Thr
>WENV181492401
OGFY01011753
398857
Bacillota
TTC
Glu
>WENV181491360
OGFY01000005
401111
Bacillota
TTC
Glu
>WENV181492057
OGFY01002707
398832
Bacillota
TTC
Glu
>WENV181492097
OGFY01003402
480324
Bacillota
TTG
Gln
>WENV181491479
OGFY01000089
280463
Bacillota
TTT
Lys
>WENV181491900
OGFY01001377
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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