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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181800223
OGRY01018817
155958
Bacillota
GAT
Ile
>WENV181800713
OGRY01076882
158247
Bacillota
>WENV181799444
OGRY01001133
155113
Bacillota
CGG
Pro
>WENV181799691
OGRY01003254
144612
Bacillota
TCT
Arg
>WENV181800477
OGRY01035579
144612
Bacillota
TCT
Arg
>WENV181799344
OGRY01000699
267649
Bacillota
TAC
Val
>WENV181799071
OGRY01000040
235134
Bacillota
GAA
Phe
>WENV181799075
OGRY01000040
235134
Bacillota
GAA
Phe
>WENV181800010
OGRY01010624
267556
Bacillota
TAC
Val
>WENV181799514
OGRY01001551
267556
Bacillota
TAC
Val
>WENV181799036
OGRY01000022
339890
Bacillota
TTG
Gln
>WENV181799653
OGRY01002928
235098
Bacillota
GAC
Val
>WENV181800087
OGRY01013365
338152
Bacillota
TTC
Glu
>WENV181799532
OGRY01001670
148239
Bacillota
TCT
Arg
>WENV181799434
OGRY01001095
148239
Bacillota
TCT
Arg
>WENV181799553
OGRY01001972
44854
Bacillota
TGA
Ser
>WENV181800002
OGRY01010410
16787
Bacillota
TGA
Ser
>WENV181800099
OGRY01013547
144577
Bacillota
GAT
Ile
>WENV181800139
OGRY01015139
354367
Bacillota
TTG
Gln
>WENV181799047
OGRY01000028
59312
Bacillota
CAG
Leu
>WENV181800115
OGRY01014418
113680
Bacillota
TAG
Leu
>WENV181799525
OGRY01001610
238910
Bacillota
CTT
Lys
>WENV181799953
OGRY01008779
338147
Bacillota
CTC
Glu
>WENV181798972
OGRY01000001
338147
Bacillota
CTC
Glu
>WENV181798971
OGRY01000001
338147
Bacillota
CTC
Glu
>WENV181798970
OGRY01000001
338147
Bacillota
CTC
Glu
>WENV181800135
OGRY01015139
114359
Bacillota
TAG
Leu
>WENV181800118
OGRY01014508
235294
Bacillota
TGC
Ala
>WENV181799733
OGRY01003992
235114
Bacillota
TTT
Lys
>WENV181800482
OGRY01036230
18548
Bacillota
GCT
Ser
>WENV181799513
OGRY01001551
144668
Bacillota
GTC
Asp
>WENV181799599
OGRY01002421
182792
Bacillota
GTC
Asp
>WENV181800727
OGRY01083226
268272
Bacillota
TGC
Ala
>WENV181800273
OGRY01021668
11034
Bacillota
GGA
Ser
>WENV181799354
OGRY01000705
11034
Bacillota
GGA
Ser
>WENV181799533
OGRY01001670
156937
Bacillota
GTG
His
>WENV181800450
OGRY01032388
274189
Bacillota
TGT
Thr
>WENV181799753
OGRY01004424
274189
Bacillota
TGT
Thr
>WENV181799600
OGRY01002421
235079
Bacillota
GAA
Phe
>WENV181799973
OGRY01009154
338149
Bacillota
CTC
Glu
>WENV181800341
OGRY01025197
185817
Bacillota
CAT
Met
>WENV181799968
OGRY01009027
245298
Bacillota
CGG
Pro
>WENV181799629
OGRY01002774
37269
Bacillota
TGA
Ser
>WENV181799375
OGRY01000793
37269
Bacillota
TGA
Ser
>WENV181799276
OGRY01000477
37269
Bacillota
TGA
Ser
>WENV181800563
OGRY01045009
155089
Bacillota
CAT
Met
>WENV181799938
OGRY01008302
258936
Bacillota
GGT
Thr
>WENV181800352
OGRY01025909
169968
Bacillota
CAT
Met
>WENV181800254
OGRY01020618
413152
Bacillota
TCC
Gly
>WENV181800472
OGRY01034792
173810
Bacillota
CAT
Met
>WENV181799515
OGRY01001551
162445
Bacillota
CAT
Met
>WENV181799842
OGRY01006030
152492
Bacillota
GGG
Pro
>WENV181799575
OGRY01002121
152492
Bacillota
GGG
Pro
>WENV181799306
OGRY01000588
100326
Bacillota
GTA
Tyr
>WENV181799247
OGRY01000408
100326
Bacillota
GTA
Tyr
>WENV181799435
OGRY01001095
144610
Bacillota
GTG
His
>WENV181800586
OGRY01047359
353537
Bacillota
GTT
Asn
>WENV181799076
OGRY01000040
240017
Bacillota
GCC
Gly
>WENV181799072
OGRY01000040
240017
Bacillota
GCC
Gly
>WENV181799012
OGRY01000011
240017
Bacillota
GCC
Gly
>WENV181799967
OGRY01009027
411547
Bacillota
CTG
Gln
>WENV181799729
OGRY01003972
411547
Bacillota
CTG
Gln
>WENV181800220
OGRY01018402
147684
Bacillota
ACG
Arg
>WENV181799498
OGRY01001369
147684
Bacillota
ACG
Arg
>WENV181799392
OGRY01000861
147684
Bacillota
ACG
Arg
>WENV181799554
OGRY01001972
4624
Bacillota
GCT
Ser
>WENV181799073
OGRY01000040
263765
Bacillota
TAC
Val
>WENV181799069
OGRY01000040
263765
Bacillota
TAC
Val
>WENV181799011
OGRY01000011
263765
Bacillota
TAC
Val
>WENV181800024
OGRY01011159
248683
Bacillota
TTT
Lys
>WENV181800611
OGRY01051759
18852
Bacillota
GCT
Ser
>WENV181800137
OGRY01015139
150597
Bacillota
TCT
Arg
>WENV181800158
OGRY01015819
144962
Bacillota
CAT
Met
>WENV181799722
OGRY01003772
411549
Bacillota
TTG
Gln
>WENV181800127
OGRY01015012
235142
Bacillota
CTT
Lys
>WENV181800005
OGRY01010528
154711
Bacillota
TGG
Pro
>WENV181800326
OGRY01024569
258997
Bacillota
CTT
Lys
>WENV181799788
OGRY01005022
148188
Bacillota
CCG
Arg
>WENV181799693
OGRY01003265
148188
Bacillota
CCG
Arg
>WENV181799824
OGRY01005530
80612
Bacillota
GTA
Tyr
>WENV181800150
OGRY01015515
163943
Bacillota
GTC
Asp
>WENV181800178
OGRY01016579
235124
Bacillota
TGG
Pro
>WENV181800746
OGRY01093769
235506
Bacillota
TGC
Ala
>WENV181800140
OGRY01015139
237963
Bacillota
TTT
Lys
>WENV181799852
OGRY01006263
338129
Bacillota
TGT
Thr
>WENV181800070
OGRY01013093
157838
Bacillota
GTC
Asp
>WENV181800327
OGRY01024572
144583
Bacillota
ACG
Arg
>WENV181799783
OGRY01004894
235171
Bacillota
CCA
Trp
>WENV181799974
OGRY01009154
144621
Bacillota
GTT
Asn
>WENV181800120
OGRY01014727
243098
Bacillota
GGT
Thr
>WENV181799848
OGRY01006184
58712
Bacillota
CAG
Leu
>WENV181800117
OGRY01014418
144762
Bacillota
TCT
Arg
>WENV181799667
OGRY01003062
245296
Bacillota
CCC
Gly
>WENV181800215
OGRY01018204
344240
Bacillota
GCC
Gly
>WENV181800434
OGRY01031133
248965
Bacillota
GCC
Gly
>WENV181799510
OGRY01001479
144594
Bacillota
CAC
Val
>WENV181799890
OGRY01006839
95563
Bacillota
GTA
Tyr
>WENV181800719
OGRY01079819
414486
Bacillota
CCC
Gly
>WENV181800353
OGRY01025909
272488
Bacillota
GAA
Phe
>WENV181799528
OGRY01001632
272488
Bacillota
GAA
Phe
>WENV181799368
OGRY01000767
272488
Bacillota
GAA
Phe
>WENV181799299
OGRY01000531
272488
Bacillota
GAA
Phe
>WENV181799231
OGRY01000320
272488
Bacillota
GAA
Phe
>WENV181799184
OGRY01000201
272488
Bacillota
GAA
Phe
>WENV181800494
OGRY01037323
114075
Bacillota
TAG
Leu
>WENV181799529
OGRY01001632
238945
Bacillota
GCC
Gly
>WENV181799112
OGRY01000070
238945
Bacillota
GCC
Gly
>WENV181799017
OGRY01000014
238945
Bacillota
GCC
Gly
>WENV181799016
OGRY01000014
238945
Bacillota
GCC
Gly
>WENV181799601
OGRY01002421
249259
Bacillota
GCC
Gly
>WENV181800163
OGRY01015906
238857
Bacillota
CCA
Trp
>WENV181800097
OGRY01013543
273862
Bacillota
TGC
Ala
>WENV181800035
OGRY01011843
338128
Bacillota
TTC
Glu
>WENV181799417
OGRY01000994
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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