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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182014435
OHBP01016203
56079
Bacillota
AAG
Leu
>WENV182014330
OHBP01003876
58120
Bacillota
AAG
Leu
>WENV182014118
OHBP01000500
175831
Bacillota
ACG
Arg
>WENV182014174
OHBP01000869
175842
Bacillota
CAC
Val
>WENV182014264
OHBP01002046
175842
Bacillota
CAC
Val
>WENV182014031
OHBP01000173
73664
Bacillota
CAG
Leu
>WENV182013994
OHBP01000082
73009
Bacillota
CAG
Leu
>WENV182014091
OHBP01000333
73009
Bacillota
CAG
Leu
>WENV182014100
OHBP01000382
73009
Bacillota
CAG
Leu
>WENV182014141
OHBP01000672
73009
Bacillota
CAG
Leu
>WENV182014142
OHBP01000677
73009
Bacillota
CAG
Leu
>WENV182014450
OHBP01021752
190476
Bacillota
CAT
Met
>WENV182014122
OHBP01000531
497729
Bacillota
CCA
Trp
>WENV182014288
OHBP01002529
291576
Bacillota
CCC
Gly
>WENV182014219
OHBP01001325
179755
Bacillota
CCG
Arg
>WENV182014099
OHBP01000370
291581
Bacillota
CGG
Pro
>WENV182013929
OHBP01000012
398852
Bacillota
CTC
Glu
>WENV182014443
OHBP01018894
398852
Bacillota
CTC
Glu
>WENV182014098
OHBP01000370
480322
Bacillota
CTG
Gln
>WENV182014231
OHBP01001613
480322
Bacillota
CTG
Gln
>WENV182014463
OHBP01027710
280492
Bacillota
CTT
Lys
>WENV182014011
OHBP01000120
330413
Bacillota
CTT
Lys
>WENV182014068
OHBP01000268
280428
Bacillota
GAA
Phe
>WENV182014254
OHBP01001841
280483
Bacillota
GAA
Phe
>WENV182014157
OHBP01000788
280447
Bacillota
GAC
Val
>WENV182014183
OHBP01000928
280447
Bacillota
GAC
Val
>WENV182014250
OHBP01001835
280447
Bacillota
GAC
Val
>WENV182014248
OHBP01001805
236579
Bacillota
GAT
Ile
>WENV182014273
OHBP01002180
405363
Bacillota
GCA
Cys
>WENV182014300
OHBP01002831
343590
Bacillota
GCC
Gly
>WENV182014069
OHBP01000268
349107
Bacillota
GCC
Gly
>WENV182014255
OHBP01001841
285756
Bacillota
GCC
Gly
>WENV182014172
OHBP01000860
5692
Bacillota
GCT
Ser
>WENV182014182
OHBP01000928
5692
Bacillota
GCT
Ser
>WENV182014419
OHBP01012511
184497
Bacillota
GGG
Pro
>WENV182014395
OHBP01008396
280444
Bacillota
GGT
Thr
>WENV182014461
OHBP01027381
99852
Bacillota
GTA
Tyr
>WENV182013940
OHBP01000019
118669
Bacillota
GTA
Tyr
>WENV182013931
OHBP01000015
175899
Bacillota
GTC
Asp
>WENV182014344
OHBP01004710
175849
Bacillota
GTC
Asp
>WENV182014351
OHBP01004940
175868
Bacillota
GTT
Asn
>WENV182014464
OHBP01029128
400963
Bacillota
GTT
Asn
>WENV182014457
OHBP01024136
46835
Bacillota
TAA
Leu
>WENV182013962
OHBP01000043
290391
Bacillota
TAC
Val
>WENV182014046
OHBP01000216
228119
Bacillota
TCT
Arg
>WENV182014147
OHBP01000724
175859
Bacillota
TCT
Arg
>WENV182014171
OHBP01000860
56074
Bacillota
TGA
Ser
>WENV182014181
OHBP01000928
56074
Bacillota
TGA
Ser
>WENV182014406
OHBP01010445
280500
Bacillota
TGC
Ala
>WENV182014247
OHBP01001805
295166
Bacillota
TGC
Ala
>WENV182014387
OHBP01008083
280436
Bacillota
TGC
Ala
>WENV182014354
OHBP01005131
323864
Bacillota
TGC
Ala
>WENV182014070
OHBP01000273
280473
Bacillota
TGG
Pro
>WENV182014323
OHBP01003641
280473
Bacillota
TGG
Pro
>WENV182014441
OHBP01018752
303718
Bacillota
TGT
Thr
>WENV182014131
OHBP01000603
398833
Bacillota
TGT
Thr
>WENV182014451
OHBP01021752
398832
Bacillota
TTC
Glu
>WENV182014295
OHBP01002724
480324
Bacillota
TTG
Gln
>WENV182014048
OHBP01000216
280476
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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