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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182024962
OHCH01010472
280500
Bacillota
TGC
Ala
>WENV182024890
OHCH01003138
291579
Bacillota
GAA
Phe
>WENV182024761
OHCH01000177
280492
Bacillota
CTT
Lys
>WENV182024779
OHCH01000251
179563
Bacillota
GAT
Ile
>WENV182024778
OHCH01000251
295166
Bacillota
TGC
Ala
>WENV182024866
OHCH01002371
284506
Bacillota
CCA
Trp
>WENV182024705
OHCH01000078
73664
Bacillota
CAG
Leu
>WENV182024949
OHCH01007865
280447
Bacillota
GAC
Val
>WENV182024855
OHCH01001913
73009
Bacillota
CAG
Leu
>WENV182024984
OHCH01017442
175859
Bacillota
TCT
Arg
>WENV182024928
OHCH01006053
175847
Bacillota
GTC
Asp
>WENV182024809
OHCH01000571
290325
Bacillota
GCC
Gly
>WENV182024944
OHCH01007148
175831
Bacillota
ACG
Arg
>WENV182024929
OHCH01006053
294020
Bacillota
TAC
Val
>WENV182024776
OHCH01000240
176223
Bacillota
CAT
Met
>WENV182024687
OHCH01000044
184121
Bacillota
TGG
Pro
>WENV182024993
OHCH01019314
187364
Bacillota
CAT
Met
>WENV182024902
OHCH01004401
175868
Bacillota
GTT
Asn
>WENV182024868
OHCH01002431
291576
Bacillota
CCC
Gly
>WENV182024907
OHCH01004566
400963
Bacillota
GTT
Asn
>WENV182024884
OHCH01002771
73638
Bacillota
AAG
Leu
>WENV182024704
OHCH01000078
56079
Bacillota
AAG
Leu
>WENV182024972
OHCH01014126
186051
Bacillota
GAT
Ile
>WENV182024825
OHCH01000836
398857
Bacillota
TTC
Glu
>WENV182024727
OHCH01000127
117745
Bacillota
GTA
Tyr
>WENV182024768
OHCH01000204
46643
Bacillota
TGA
Ser
>WENV182024892
OHCH01003305
179755
Bacillota
CCG
Arg
>WENV182024886
OHCH01002899
46835
Bacillota
TAA
Leu
>WENV182024891
OHCH01003239
118669
Bacillota
GTA
Tyr
>WENV182024965
OHCH01011931
294275
Bacillota
TGC
Ala
>WENV182024771
OHCH01000227
280462
Bacillota
GAA
Phe
>WENV182024691
OHCH01000050
398852
Bacillota
CTC
Glu
>WENV182024773
OHCH01000229
398852
Bacillota
CTC
Glu
>WENV182024737
OHCH01000151
175857
Bacillota
GTG
His
>WENV182024739
OHCH01000151
280463
Bacillota
TTT
Lys
>WENV182024772
OHCH01000227
280463
Bacillota
TTT
Lys
>WENV182024974
OHCH01014672
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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