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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182057587
OHEP01000001
280462
Bacillota
GAA
Phe
>WENV182057588
OHEP01000001
280463
Bacillota
TTT
Lys
>WENV182057641
OHEP01000067
280492
Bacillota
CTT
Lys
>WENV182057674
OHEP01000128
398852
Bacillota
CTC
Glu
>WENV182057684
OHEP01000141
290391
Bacillota
TAC
Val
>WENV182057687
OHEP01000141
285756
Bacillota
GCC
Gly
>WENV182057736
OHEP01000265
398852
Bacillota
CTC
Glu
>WENV182057737
OHEP01000266
284723
Bacillota
TAC
Val
>WENV182057738
OHEP01000266
187364
Bacillota
CAT
Met
>WENV182057739
OHEP01000266
284723
Bacillota
TAC
Val
>WENV182057740
OHEP01000266
187364
Bacillota
CAT
Met
>WENV182057754
OHEP01000301
117745
Bacillota
GTA
Tyr
>WENV182057800
OHEP01000401
289123
Bacillota
GGT
Thr
>WENV182057808
OHEP01000429
280492
Bacillota
CTT
Lys
>WENV182057812
OHEP01000457
407726
Bacillota
CTG
Gln
>WENV182057853
OHEP01000627
56079
Bacillota
AAG
Leu
>WENV182057870
OHEP01000683
229015
Bacillota
GTG
His
>WENV182057877
OHEP01000701
25955
Bacillota
GCT
Ser
>WENV182057931
OHEP01001086
510477
Bacillota
TCC
Gly
>WENV182057932
OHEP01001086
184539
Bacillota
TCT
Arg
>WENV182057934
OHEP01001109
312274
Bacillota
GGC
Ala
>WENV182057959
OHEP01001287
291629
Bacillota
CCA
Trp
>WENV182057997
OHEP01001591
56074
Bacillota
TGA
Ser
>WENV182058007
OHEP01001667
303718
Bacillota
TGT
Thr
>WENV182058014
OHEP01001712
346451
Bacillota
TTT
Lys
>WENV182058036
OHEP01002007
283367
Bacillota
GCC
Gly
>WENV182058053
OHEP01002126
405393
Bacillota
GCC
Gly
>WENV182058065
OHEP01002203
497729
Bacillota
CCA
Trp
>WENV182058095
OHEP01002555
405393
Bacillota
GCC
Gly
>WENV182058138
OHEP01003193
175849
Bacillota
GTC
Asp
>WENV182058139
OHEP01003193
280428
Bacillota
GAA
Phe
>WENV182058155
OHEP01003386
398854
Bacillota
CTC
Glu
>WENV182058243
OHEP01005076
407840
Bacillota
TTC
Glu
>WENV182058262
OHEP01005360
398857
Bacillota
TTC
Glu
>WENV182058313
OHEP01006971
46835
Bacillota
TAA
Leu
>WENV182058362
OHEP01008762
280447
Bacillota
GAC
Val
>WENV182058365
OHEP01008861
398835
Bacillota
GCC
Gly
>WENV182058394
OHEP01010365
280436
Bacillota
TGC
Ala
>WENV182058414
OHEP01011060
280473
Bacillota
TGG
Pro
>WENV182058419
OHEP01011211
175825
Bacillota
GAT
Ile
>WENV182058441
OHEP01012602
175868
Bacillota
GTT
Asn
>WENV182058482
OHEP01014556
190476
Bacillota
CAT
Met
>WENV182058483
OHEP01014556
398832
Bacillota
TTC
Glu
>WENV182058497
OHEP01015439
27216
Bacillota
GCT
Ser
>WENV182058520
OHEP01016781
73009
Bacillota
CAG
Leu
>WENV182058523
OHEP01016972
285601
Bacillota
TTC
Glu
>WENV182058550
OHEP01018995
480322
Bacillota
CTG
Gln
>WENV182058551
OHEP01018995
291581
Bacillota
CGG
Pro
>WENV182058589
OHEP01024203
480324
Bacillota
TTG
Gln
>WENV182058617
OHEP01028265
481217
Bacillota
GCA
Cys
>WENV182058622
OHEP01030020
398833
Bacillota
TGT
Thr
>WENV182058662
OHEP01037893
179917
Bacillota
CAT
Met
>WENV182058748
OHEP01054037
175842
Bacillota
CAC
Val
>WENV182058771
OHEP01064603
291576
Bacillota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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