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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182186482
OHOJ01000040
59312
Bacillota
CAG
Leu
>WENV182186481
OHOJ01000040
44859
Bacillota
AAG
Leu
>WENV182186480
OHOJ01000040
44859
Bacillota
AAG
Leu
>WENV182186490
OHOJ01000067
95563
Bacillota
GTA
Tyr
>WENV182186495
OHOJ01000077
37071
Bacillota
TGA
Ser
>WENV182186501
OHOJ01000078
235142
Bacillota
CTT
Lys
>WENV182186512
OHOJ01000137
338147
Bacillota
CTC
Glu
>WENV182186532
OHOJ01000148
235142
Bacillota
CTT
Lys
>WENV182186537
OHOJ01000181
338147
Bacillota
CTC
Glu
>WENV182186543
OHOJ01000202
309417
Bacillota
GGC
Ala
>WENV182186555
OHOJ01000249
235114
Bacillota
TTT
Lys
>WENV182186553
OHOJ01000249
144610
Bacillota
GTG
His
>WENV182186577
OHOJ01000317
338147
Bacillota
CTC
Glu
>WENV182186603
OHOJ01000577
413179
Bacillota
CCC
Gly
>WENV182186606
OHOJ01000628
59312
Bacillota
CAG
Leu
>WENV182186644
OHOJ01001215
58712
Bacillota
CAG
Leu
>WENV182186656
OHOJ01001338
238910
Bacillota
CTT
Lys
>WENV182186661
OHOJ01001491
144583
Bacillota
ACG
Arg
>WENV182186683
OHOJ01001925
235098
Bacillota
GAC
Val
>WENV182186684
OHOJ01001967
148188
Bacillota
CCG
Arg
>WENV182186704
OHOJ01002290
247734
Bacillota
TGC
Ala
>WENV182186718
OHOJ01002568
338147
Bacillota
CTC
Glu
>WENV182186727
OHOJ01002706
245298
Bacillota
CGG
Pro
>WENV182186726
OHOJ01002706
411547
Bacillota
CTG
Gln
>WENV182186758
OHOJ01003600
429429
Bacillota
CCA
Trp
>WENV182186764
OHOJ01003925
44854
Bacillota
TGA
Ser
>WENV182186765
OHOJ01003925
4624
Bacillota
GCT
Ser
>WENV182186771
OHOJ01004021
235078
Bacillota
TAC
Val
>WENV182186774
OHOJ01004021
240017
Bacillota
GCC
Gly
>WENV182186795
OHOJ01004440
235095
Bacillota
GGT
Thr
>WENV182186798
OHOJ01004481
11034
Bacillota
GGA
Ser
>WENV182186801
OHOJ01004651
411549
Bacillota
TTG
Gln
>WENV182186803
OHOJ01004661
298620
Bacillota
CAT
Met
>WENV182186810
OHOJ01004868
144612
Bacillota
TCT
Arg
>WENV182186830
OHOJ01005722
304022
Bacillota
GCC
Gly
>WENV182186836
OHOJ01005853
253195
Bacillota
TTT
Lys
>WENV182186873
OHOJ01008037
338129
Bacillota
TGT
Thr
>WENV182186917
OHOJ01011059
245296
Bacillota
CCC
Gly
>WENV182186920
OHOJ01011250
235124
Bacillota
TGG
Pro
>WENV182186943
OHOJ01014600
243401
Bacillota
CGT
Thr
>WENV182187004
OHOJ01023051
235154
Bacillota
GTT
Asn
>WENV182187011
OHOJ01023217
144652
Bacillota
GTC
Asp
>WENV182187040
OHOJ01028610
144594
Bacillota
CAC
Val
>WENV182187045
OHOJ01030274
287000
Bacillota
GTT
Asn
>WENV182187053
OHOJ01031075
235150
Bacillota
TGC
Ala
>WENV182187078
OHOJ01037065
144612
Bacillota
TCT
Arg
>WENV182187080
OHOJ01037344
247057
Bacillota
TGC
Ala
>WENV182187086
OHOJ01039265
80612
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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