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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182260183
OHTJ01000147
245296
Bacillota
CCC
Gly
>WENV182260233
OHTJ01000295
235079
Bacillota
GAA
Phe
>WENV182260242
OHTJ01000309
338127
Bacillota
TTG
Gln
>WENV182260244
OHTJ01000312
235124
Bacillota
TGG
Pro
>WENV182260246
OHTJ01000319
338128
Bacillota
TTC
Glu
>WENV182260259
OHTJ01000357
338128
Bacillota
TTC
Glu
>WENV182260268
OHTJ01000396
144594
Bacillota
CAC
Val
>WENV182260275
OHTJ01000436
245344
Bacillota
GAA
Phe
>WENV182260296
OHTJ01000575
338129
Bacillota
TGT
Thr
>WENV182260308
OHTJ01000653
248683
Bacillota
TTT
Lys
>WENV182260314
OHTJ01000697
235095
Bacillota
GGT
Thr
>WENV182260319
OHTJ01000715
235095
Bacillota
GGT
Thr
>WENV182260317
OHTJ01000715
235171
Bacillota
CCA
Trp
>WENV182260321
OHTJ01000746
11034
Bacillota
GGA
Ser
>WENV182260325
OHTJ01000801
411547
Bacillota
CTG
Gln
>WENV182260350
OHTJ01001066
148188
Bacillota
CCG
Arg
>WENV182260351
OHTJ01001068
241471
Bacillota
TGC
Ala
>WENV182260357
OHTJ01001138
247057
Bacillota
TGC
Ala
>WENV182260359
OHTJ01001187
344240
Bacillota
GCC
Gly
>WENV182260378
OHTJ01001510
144612
Bacillota
TCT
Arg
>WENV182260383
OHTJ01001549
44854
Bacillota
TGA
Ser
>WENV182260384
OHTJ01001549
4624
Bacillota
GCT
Ser
>WENV182260385
OHTJ01001563
413152
Bacillota
TCC
Gly
>WENV182260403
OHTJ01001832
235098
Bacillota
GAC
Val
>WENV182260408
OHTJ01001926
147691
Bacillota
GAT
Ile
>WENV182260411
OHTJ01002019
144583
Bacillota
ACG
Arg
>WENV182260421
OHTJ01002361
338149
Bacillota
CTC
Glu
>WENV182260422
OHTJ01002361
144621
Bacillota
GTT
Asn
>WENV182260425
OHTJ01002409
249522
Bacillota
TAC
Val
>WENV182260440
OHTJ01002808
58712
Bacillota
CAG
Leu
>WENV182260441
OHTJ01002852
411549
Bacillota
TTG
Gln
>WENV182260446
OHTJ01002941
338152
Bacillota
TTC
Glu
>WENV182260463
OHTJ01003642
243098
Bacillota
GGT
Thr
>WENV182260527
OHTJ01005068
11034
Bacillota
GGA
Ser
>WENV182260552
OHTJ01005975
238974
Bacillota
GAA
Phe
>WENV182260559
OHTJ01006240
59312
Bacillota
CAG
Leu
>WENV182260566
OHTJ01006553
147684
Bacillota
ACG
Arg
>WENV182260568
OHTJ01006580
150669
Bacillota
GAT
Ile
>WENV182260579
OHTJ01007388
235098
Bacillota
GAC
Val
>WENV182260594
OHTJ01008446
235091
Bacillota
CTT
Lys
>WENV182260615
OHTJ01009982
153911
Bacillota
GAT
Ile
>WENV182260625
OHTJ01010602
95659
Bacillota
GTA
Tyr
>WENV182260627
OHTJ01010855
238945
Bacillota
GCC
Gly
>WENV182260639
OHTJ01011749
338147
Bacillota
CTC
Glu
>WENV182260640
OHTJ01011769
37269
Bacillota
TGA
Ser
>WENV182260643
OHTJ01011801
148495
Bacillota
TCT
Arg
>WENV182260646
OHTJ01011914
237265
Bacillota
TAC
Val
>WENV182260666
OHTJ01012779
339803
Bacillota
TTG
Gln
>WENV182260664
OHTJ01012779
238151
Bacillota
>WENV182260671
OHTJ01013009
239812
Bacillota
CCT
Arg
>WENV182260673
OHTJ01013387
156189
Bacillota
GAT
Ile
>WENV182260685
OHTJ01014795
127136
Bacillota
GTG
His
>WENV182260724
OHTJ01021012
59312
Bacillota
CAG
Leu
>WENV182260727
OHTJ01021310
235134
Bacillota
GAA
Phe
>WENV182260728
OHTJ01021310
240017
Bacillota
GCC
Gly
>WENV182260734
OHTJ01022388
235150
Bacillota
TGC
Ala
>WENV182260747
OHTJ01023526
37269
Bacillota
TGA
Ser
>WENV182260756
OHTJ01025023
149024
Bacillota
GGT
Thr
>WENV182260770
OHTJ01028024
238910
Bacillota
CTT
Lys
>WENV182260793
OHTJ01030653
153911
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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