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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182338505
OHZZ01011901
405363
Bacillota
GCA
Cys
>WENV182338359
OHZZ01000421
280428
Bacillota
GAA
Phe
>WENV182338151
OHZZ01000008
280492
Bacillota
CTT
Lys
>WENV182338203
OHZZ01000050
280492
Bacillota
CTT
Lys
>WENV182338283
OHZZ01000176
175842
Bacillota
CAC
Val
>WENV182338353
OHZZ01000404
190476
Bacillota
CAT
Met
>WENV182338363
OHZZ01000449
190476
Bacillota
CAT
Met
>WENV182338140
OHZZ01000004
73664
Bacillota
CAG
Leu
>WENV182338385
OHZZ01000736
5692
Bacillota
GCT
Ser
>WENV182338222
OHZZ01000071
189473
Bacillota
GAT
Ile
>WENV182338378
OHZZ01000676
291581
Bacillota
CGG
Pro
>WENV182338249
OHZZ01000096
175859
Bacillota
TCT
Arg
>WENV182338285
OHZZ01000179
175859
Bacillota
TCT
Arg
>WENV182338254
OHZZ01000100
175831
Bacillota
ACG
Arg
>WENV182338512
OHZZ01012922
346451
Bacillota
TTT
Lys
>WENV182338217
OHZZ01000065
480322
Bacillota
CTG
Gln
>WENV182338377
OHZZ01000676
480322
Bacillota
CTG
Gln
>WENV182338355
OHZZ01000406
175868
Bacillota
GTT
Asn
>WENV182338349
OHZZ01000389
322848
Bacillota
CTT
Lys
>WENV182338348
OHZZ01000389
398854
Bacillota
CTC
Glu
>WENV182338351
OHZZ01000392
291576
Bacillota
CCC
Gly
>WENV182338241
OHZZ01000088
480324
Bacillota
TTG
Gln
>WENV182338437
OHZZ01002812
480324
Bacillota
TTG
Gln
>WENV182338138
OHZZ01000004
56079
Bacillota
AAG
Leu
>WENV182338139
OHZZ01000004
56079
Bacillota
AAG
Leu
>WENV182338271
OHZZ01000145
404126
Bacillota
GCC
Gly
>WENV182338260
OHZZ01000112
117745
Bacillota
GTA
Tyr
>WENV182338284
OHZZ01000176
280444
Bacillota
GGT
Thr
>WENV182338358
OHZZ01000409
280444
Bacillota
GGT
Thr
>WENV182338374
OHZZ01000611
46643
Bacillota
TGA
Ser
>WENV182338339
OHZZ01000356
179755
Bacillota
CCG
Arg
>WENV182338354
OHZZ01000404
398832
Bacillota
TTC
Glu
>WENV182338364
OHZZ01000449
398832
Bacillota
TTC
Glu
>WENV182338288
OHZZ01000196
280462
Bacillota
GAA
Phe
>WENV182338132
OHZZ01000002
398852
Bacillota
CTC
Glu
>WENV182338157
OHZZ01000010
398852
Bacillota
CTC
Glu
>WENV182338340
OHZZ01000376
398852
Bacillota
CTC
Glu
>WENV182338370
OHZZ01000577
398852
Bacillota
CTC
Glu
>WENV182338338
OHZZ01000354
184539
Bacillota
TCT
Arg
>WENV182338300
OHZZ01000219
398833
Bacillota
TGT
Thr
>WENV182338357
OHZZ01000409
175849
Bacillota
GTC
Asp
>WENV182338289
OHZZ01000196
280463
Bacillota
TTT
Lys
>WENV182338384
OHZZ01000736
56074
Bacillota
TGA
Ser
>WENV182338322
OHZZ01000300
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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