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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182418023
OIGE01003094
24650
Bacillota
TAA
Leu
>WENV182418024
OIGE01003320
16842
Bacillota
CGA
Ser
>WENV182418017
OIGE01003086
267649
Bacillota
TAC
Val
>WENV182418033
OIGE01004413
235137
Bacillota
TGC
Ala
>WENV182417940
OIGE01000377
391536
Bacillota
TTC
Glu
>WENV182418047
OIGE01007983
338143
Bacillota
CTC
Glu
>WENV182418016
OIGE01003086
144668
Bacillota
GTC
Asp
>WENV182418027
OIGE01003684
429429
Bacillota
CCA
Trp
>WENV182418021
OIGE01003086
313454
Bacillota
GAA
Phe
>WENV182417929
OIGE01000322
16834
Bacillota
GCT
Ser
>WENV182417960
OIGE01000719
114002
Bacillota
CAA
Leu
>WENV182417941
OIGE01000377
243612
Bacillota
TAC
Val
>WENV182418029
OIGE01003695
144766
Bacillota
CAT
Met
>WENV182417935
OIGE01000352
147135
Bacillota
ACG
Arg
>WENV182418000
OIGE01002083
342895
Bacillota
CAT
Met
>WENV182418022
OIGE01003086
313164
Bacillota
TTT
Lys
>WENV182418005
OIGE01002251
18852
Bacillota
GCT
Ser
>WENV182417989
OIGE01001844
194150
Bacillota
TGG
Pro
>WENV182418054
OIGE01009885
59296
Bacillota
AAG
Leu
>WENV182417908
OIGE01000144
368876
Bacillota
GCC
Gly
>WENV182417915
OIGE01000201
147674
Bacillota
TCT
Arg
>WENV182418059
OIGE01011459
163943
Bacillota
GTC
Asp
>WENV182417946
OIGE01000413
243613
Bacillota
GTG
His
>WENV182417980
OIGE01001227
152491
Bacillota
CAT
Met
>WENV182417976
OIGE01001227
273029
Bacillota
TGT
Thr
>WENV182417979
OIGE01001227
281472
Bacillota
GGT
Thr
>WENV182417991
OIGE01001844
178024
Bacillota
TCT
Arg
>WENV182417970
OIGE01001063
413657
Bacillota
CCC
Gly
>WENV182417939
OIGE01000377
287034
Bacillota
GTT
Asn
>WENV182417947
OIGE01000413
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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