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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182425728
OIHM01000198
243612
Bacillota
TAC
Val
>WENV182425732
OIHM01000201
235693
Bacillota
GGT
Thr
>WENV182425733
OIHM01000201
152491
Bacillota
CAT
Met
>WENV182425737
OIHM01000215
235127
Bacillota
TTT
Lys
>WENV182425734
OIHM01000215
147674
Bacillota
TCT
Arg
>WENV182425756
OIHM01000564
241471
Bacillota
TGC
Ala
>WENV182425763
OIHM01000908
16842
Bacillota
CGA
Ser
>WENV182425766
OIHM01000932
37437
Bacillota
TAA
Leu
>WENV182425769
OIHM01001000
144668
Bacillota
GTC
Asp
>WENV182425773
OIHM01001267
16834
Bacillota
GCT
Ser
>WENV182425790
OIHM01002664
235095
Bacillota
GGT
Thr
>WENV182425798
OIHM01003067
243647
Bacillota
TTT
Lys
>WENV182425796
OIHM01003067
243613
Bacillota
GTG
His
>WENV182425797
OIHM01003067
343027
Bacillota
TTG
Gln
>WENV182425804
OIHM01003972
250349
Bacillota
GAA
Phe
>WENV182425803
OIHM01003972
235197
Bacillota
GTC
Asp
>WENV182425807
OIHM01004243
114002
Bacillota
CAA
Leu
>WENV182425812
OIHM01004404
80612
Bacillota
GTA
Tyr
>WENV182425813
OIHM01004482
58712
Bacillota
CAG
Leu
>WENV182425816
OIHM01004907
239832
Bacillota
TGT
Thr
>WENV182425838
OIHM01007061
235117
Bacillota
TAC
Val
>WENV182425837
OIHM01007061
249259
Bacillota
GCC
Gly
>WENV182425841
OIHM01007223
413657
Bacillota
CCC
Gly
>WENV182425842
OIHM01007287
342895
Bacillota
CAT
Met
>WENV182425844
OIHM01007787
147135
Bacillota
ACG
Arg
>WENV182425852
OIHM01008972
235098
Bacillota
GAC
Val
>WENV182425853
OIHM01009502
148188
Bacillota
CCG
Arg
>WENV182425858
OIHM01010896
149041
Bacillota
GTC
Asp
>WENV182425862
OIHM01011985
411549
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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