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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182428357
OIHZ01001412
343590
Bacillota
GCC
Gly
>WENV182428317
OIHZ01000613
405363
Bacillota
GCA
Cys
>WENV182428459
OIHZ01008103
280492
Bacillota
CTT
Lys
>WENV182428288
OIHZ01000355
175842
Bacillota
CAC
Val
>WENV182428376
OIHZ01001805
179176
Bacillota
ACG
Arg
>WENV182428284
OIHZ01000304
190476
Bacillota
CAT
Met
>WENV182428405
OIHZ01002995
73664
Bacillota
CAG
Leu
>WENV182428307
OIHZ01000493
280447
Bacillota
GAC
Val
>WENV182428367
OIHZ01001544
5692
Bacillota
GCT
Ser
>WENV182428250
OIHZ01000154
73009
Bacillota
CAG
Leu
>WENV182428266
OIHZ01000202
291581
Bacillota
CGG
Pro
>WENV182428308
OIHZ01000494
175831
Bacillota
ACG
Arg
>WENV182428365
OIHZ01001538
284627
Bacillota
GAA
Phe
>WENV182428265
OIHZ01000202
480322
Bacillota
CTG
Gln
>WENV182428372
OIHZ01001606
175868
Bacillota
GTT
Asn
>WENV182428300
OIHZ01000467
398854
Bacillota
CTC
Glu
>WENV182428337
OIHZ01000937
291576
Bacillota
CCC
Gly
>WENV182428338
OIHZ01001018
480324
Bacillota
TTG
Gln
>WENV182428450
OIHZ01006594
497729
Bacillota
CCA
Trp
>WENV182428441
OIHZ01005346
56079
Bacillota
AAG
Leu
>WENV182428348
OIHZ01001171
323864
Bacillota
TGC
Ala
>WENV182428245
OIHZ01000124
280444
Bacillota
GGT
Thr
>WENV182428345
OIHZ01001104
280444
Bacillota
GGT
Thr
>WENV182428313
OIHZ01000569
179755
Bacillota
CCG
Arg
>WENV182428467
OIHZ01009161
46835
Bacillota
TAA
Leu
>WENV182428285
OIHZ01000304
398832
Bacillota
TTC
Glu
>WENV182428335
OIHZ01000900
280462
Bacillota
GAA
Phe
>WENV182428383
OIHZ01002211
398852
Bacillota
CTC
Glu
>WENV182428243
OIHZ01000109
398833
Bacillota
TGT
Thr
>WENV182428344
OIHZ01001104
175849
Bacillota
GTC
Asp
>WENV182428336
OIHZ01000900
280463
Bacillota
TTT
Lys
>WENV182428366
OIHZ01001544
56074
Bacillota
TGA
Ser
>WENV182428358
OIHZ01001419
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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