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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182453901
OIMK01023336
280500
Bacillota
TGC
Ala
>WENV182453880
OIMK01018304
405363
Bacillota
GCA
Cys
>WENV182453709
OIMK01001591
280428
Bacillota
GAA
Phe
>WENV182453833
OIMK01009185
291579
Bacillota
GAA
Phe
>WENV182453830
OIMK01008897
280492
Bacillota
CTT
Lys
>WENV182453740
OIMK01002540
175842
Bacillota
CAC
Val
>WENV182453871
OIMK01016274
184497
Bacillota
GGG
Pro
>WENV182453760
OIMK01003716
179176
Bacillota
ACG
Arg
>WENV182453653
OIMK01000131
190476
Bacillota
CAT
Met
>WENV182453890
OIMK01020530
73664
Bacillota
CAG
Leu
>WENV182453662
OIMK01000196
280447
Bacillota
GAC
Val
>WENV182453794
OIMK01005727
5692
Bacillota
GCT
Ser
>WENV182453665
OIMK01000269
73009
Bacillota
CAG
Leu
>WENV182453696
OIMK01000990
481217
Bacillota
GCA
Cys
>WENV182453667
OIMK01000272
291581
Bacillota
CGG
Pro
>WENV182453762
OIMK01003860
175859
Bacillota
TCT
Arg
>WENV182453862
OIMK01014067
21311
Bacillota
GCT
Ser
>WENV182453706
OIMK01001229
175831
Bacillota
ACG
Arg
>WENV182453638
OIMK01000019
187589
Bacillota
CAT
Met
>WENV182453867
OIMK01014929
294020
Bacillota
TAC
Val
>WENV182453666
OIMK01000272
480322
Bacillota
CTG
Gln
>WENV182453791
OIMK01005394
480322
Bacillota
CTG
Gln
>WENV182453816
OIMK01007117
175868
Bacillota
GTT
Asn
>WENV182453754
OIMK01003440
322848
Bacillota
CTT
Lys
>WENV182453689
OIMK01000809
398854
Bacillota
CTC
Glu
>WENV182453732
OIMK01002172
291576
Bacillota
CCC
Gly
>WENV182453651
OIMK01000120
480324
Bacillota
TTG
Gln
>WENV182453690
OIMK01000817
303718
Bacillota
TGT
Thr
>WENV182453752
OIMK01003397
56079
Bacillota
AAG
Leu
>WENV182453673
OIMK01000443
280444
Bacillota
GGT
Thr
>WENV182453720
OIMK01001767
280444
Bacillota
GGT
Thr
>WENV182453823
OIMK01008170
291597
Bacillota
TGC
Ala
>WENV182453710
OIMK01001591
321753
Bacillota
GCC
Gly
>WENV182453769
OIMK01004163
179755
Bacillota
CCG
Arg
>WENV182453832
OIMK01009034
46835
Bacillota
TAA
Leu
>WENV182453654
OIMK01000131
398832
Bacillota
TTC
Glu
>WENV182453831
OIMK01009034
175915
Bacillota
GTC
Asp
>WENV182453640
OIMK01000019
280476
Bacillota
TTT
Lys
>WENV182453777
OIMK01004737
398852
Bacillota
CTC
Glu
>WENV182453834
OIMK01009185
309916
Bacillota
TTT
Lys
>WENV182453691
OIMK01000832
398833
Bacillota
TGT
Thr
>WENV182453719
OIMK01001767
175849
Bacillota
GTC
Asp
>WENV182453793
OIMK01005727
56074
Bacillota
TGA
Ser
>WENV182453702
OIMK01001131
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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