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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182457464
OINE01000225
235137
Bacillota
TGC
Ala
>WENV182457465
OINE01000225
235154
Bacillota
GTT
Asn
>WENV182457482
OINE01000407
338143
Bacillota
CTC
Glu
>WENV182457486
OINE01000474
281472
Bacillota
GGT
Thr
>WENV182457487
OINE01000474
152491
Bacillota
CAT
Met
>WENV182457494
OINE01000627
353537
Bacillota
GTT
Asn
>WENV182457503
OINE01001107
243612
Bacillota
TAC
Val
>WENV182457520
OINE01002482
59296
Bacillota
AAG
Leu
>WENV182457528
OINE01003085
235197
Bacillota
GTC
Asp
>WENV182457532
OINE01003671
194150
Bacillota
TGG
Pro
>WENV182457534
OINE01003807
16842
Bacillota
CGA
Ser
>WENV182457535
OINE01003818
243613
Bacillota
GTG
His
>WENV182457536
OINE01003818
343027
Bacillota
TTG
Gln
>WENV182457542
OINE01004103
267649
Bacillota
TAC
Val
>WENV182457544
OINE01004424
37213
Bacillota
TGA
Ser
>WENV182457545
OINE01004424
10680
Bacillota
GGA
Ser
>WENV182457546
OINE01004502
16834
Bacillota
GCT
Ser
>WENV182457555
OINE01005145
368876
Bacillota
GCC
Gly
>WENV182457557
OINE01005145
37437
Bacillota
TAA
Leu
>WENV182457562
OINE01005752
119513
Bacillota
CAA
Leu
>WENV182457563
OINE01005814
236175
Bacillota
CCA
Trp
>WENV182457567
OINE01006009
342895
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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