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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182809830
OJWS01005481
270475
Bacillota
GAA
Phe
>WENV182809799
OJWS01002152
361659
Bacillota
GCC
Gly
>WENV182809716
OJWS01000096
63862
Bacillota
CAG
Leu
>WENV182809798
OJWS01002152
114359
Bacillota
TAG
Leu
>WENV182809784
OJWS01001002
268272
Bacillota
TGC
Ala
>WENV182809808
OJWS01002913
338550
Bacillota
>WENV182809809
OJWS01002913
338550
Bacillota
>WENV182809778
OJWS01000661
258936
Bacillota
GGT
Thr
>WENV182809698
OJWS01000051
81172
Bacillota
>WENV182809745
OJWS01000238
342895
Bacillota
CAT
Met
>WENV182809801
OJWS01002152
150597
Bacillota
TCT
Arg
>WENV182809729
OJWS01000155
146785
Bacillota
>WENV182809803
OJWS01002159
286963
Bacillota
CTT
Lys
>WENV182809795
OJWS01002152
235905
Bacillota
GTG
His
>WENV182809800
OJWS01002152
411739
Bacillota
TCC
Gly
>WENV182809751
OJWS01000319
235638
Bacillota
GAA
Phe
>WENV182809797
OJWS01002152
237963
Bacillota
TTT
Lys
>WENV182809737
OJWS01000183
287296
Bacillota
TTT
Lys
>WENV182809783
OJWS01000959
273862
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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