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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182892912
OKSI01013326
352996
Bacillota
TTC
Glu
>WENV182892595
OKSI01001421
144612
Bacillota
TCT
Arg
>WENV182892937
OKSI01016040
154063
Bacillota
CGG
Pro
>WENV182893057
OKSI01036490
235134
Bacillota
GAA
Phe
>WENV182892628
OKSI01001678
235098
Bacillota
GAC
Val
>WENV182892904
OKSI01012603
44854
Bacillota
TGA
Ser
>WENV182892887
OKSI01010872
144577
Bacillota
GAT
Ile
>WENV182892571
OKSI01001125
37071
Bacillota
TGA
Ser
>WENV182892446
OKSI01000304
59312
Bacillota
CAG
Leu
>WENV182893072
OKSI01040697
338147
Bacillota
CTC
Glu
>WENV182892851
OKSI01008499
235114
Bacillota
TTT
Lys
>WENV182892509
OKSI01000570
235114
Bacillota
TTT
Lys
>WENV182892445
OKSI01000304
44859
Bacillota
AAG
Leu
>WENV182893030
OKSI01030484
235079
Bacillota
GAA
Phe
>WENV182892886
OKSI01010872
235087
Bacillota
TGC
Ala
>WENV182892834
OKSI01007723
173314
Bacillota
GAT
Ile
>WENV182892679
OKSI01002513
338149
Bacillota
CTC
Glu
>WENV182893102
OKSI01050086
245298
Bacillota
CGG
Pro
>WENV182892973
OKSI01019979
287000
Bacillota
GTT
Asn
>WENV182892926
OKSI01014725
413152
Bacillota
TCC
Gly
>WENV182892849
OKSI01008499
144610
Bacillota
GTG
His
>WENV182893058
OKSI01036490
240017
Bacillota
GCC
Gly
>WENV182893101
OKSI01050086
411547
Bacillota
CTG
Gln
>WENV182892905
OKSI01012603
4624
Bacillota
GCT
Ser
>WENV182892387
OKSI01000093
263765
Bacillota
TAC
Val
>WENV182892672
OKSI01002446
235095
Bacillota
GGT
Thr
>WENV182892615
OKSI01001529
419639
Bacillota
GCA
Cys
>WENV182892631
OKSI01001738
411549
Bacillota
TTG
Gln
>WENV182892473
OKSI01000378
235142
Bacillota
CTT
Lys
>WENV182892661
OKSI01002265
148188
Bacillota
CCG
Arg
>WENV182892562
OKSI01001081
80612
Bacillota
GTA
Tyr
>WENV182892938
OKSI01016059
235124
Bacillota
TGG
Pro
>WENV182893056
OKSI01036490
157838
Bacillota
GTC
Asp
>WENV182893001
OKSI01024240
144583
Bacillota
ACG
Arg
>WENV182892798
OKSI01006231
236037
Bacillota
GTG
His
>WENV182892864
OKSI01009320
235171
Bacillota
CCA
Trp
>WENV182892680
OKSI01002513
144621
Bacillota
GTT
Asn
>WENV182892508
OKSI01000570
235113
Bacillota
GAA
Phe
>WENV182892861
OKSI01009013
243098
Bacillota
GGT
Thr
>WENV182892732
OKSI01003817
58712
Bacillota
CAG
Leu
>WENV182892875
OKSI01009781
245296
Bacillota
CCC
Gly
>WENV182892780
OKSI01005461
245296
Bacillota
CCC
Gly
>WENV182892614
OKSI01001529
344240
Bacillota
GCC
Gly
>WENV182893048
OKSI01035440
198135
Bacillota
GAT
Ile
>WENV182893004
OKSI01024835
198135
Bacillota
GAT
Ile
>WENV182892612
OKSI01001529
196632
Bacillota
GTC
Asp
>WENV182892833
OKSI01007723
299139
Bacillota
TGC
Ala
>WENV182893002
OKSI01024327
144594
Bacillota
CAC
Val
>WENV182892506
OKSI01000570
95563
Bacillota
GTA
Tyr
>WENV182892977
OKSI01020320
272488
Bacillota
GAA
Phe
>WENV182892962
OKSI01018945
114075
Bacillota
TAG
Leu
>WENV182892857
OKSI01008886
273862
Bacillota
TGC
Ala
>WENV182892566
OKSI01001109
338128
Bacillota
TTC
Glu
>WENV182892514
OKSI01000620
338128
Bacillota
TTC
Glu
>WENV182892613
OKSI01001529
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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