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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183021354
OLFL01000216
411549
Bacillota
TTG
Gln
>WENV183021357
OLFL01000234
58712
Bacillota
CAG
Leu
>WENV183021369
OLFL01000582
100326
Bacillota
GTA
Tyr
>WENV183021373
OLFL01000641
144594
Bacillota
CAC
Val
>WENV183021397
OLFL01001712
11034
Bacillota
GGA
Ser
>WENV183021402
OLFL01001915
338149
Bacillota
CTC
Glu
>WENV183021403
OLFL01001915
144621
Bacillota
GTT
Asn
>WENV183021408
OLFL01002083
245296
Bacillota
CCC
Gly
>WENV183021414
OLFL01002221
144652
Bacillota
GTC
Asp
>WENV183021425
OLFL01002866
59312
Bacillota
CAG
Leu
>WENV183021426
OLFL01002889
256380
Bacillota
>WENV183021428
OLFL01003001
235154
Bacillota
GTT
Asn
>WENV183021438
OLFL01003326
196621
Bacillota
GTC
Asp
>WENV183021439
OLFL01003326
235079
Bacillota
GAA
Phe
>WENV183021451
OLFL01003848
338129
Bacillota
TGT
Thr
>WENV183021453
OLFL01004142
235098
Bacillota
GAC
Val
>WENV183021454
OLFL01004448
429429
Bacillota
CCA
Trp
>WENV183021456
OLFL01004523
148188
Bacillota
CCG
Arg
>WENV183021463
OLFL01005034
239832
Bacillota
TGT
Thr
>WENV183021471
OLFL01005465
144672
Bacillota
TCT
Arg
>WENV183021475
OLFL01005910
246023
Bacillota
TGC
Ala
>WENV183021490
OLFL01007384
235095
Bacillota
GGT
Thr
>WENV183021491
OLFL01007796
338147
Bacillota
CTC
Glu
>WENV183021494
OLFL01009145
411547
Bacillota
CTG
Gln
>WENV183021501
OLFL01010748
198770
Bacillota
GTC
Asp
>WENV183021516
OLFL01013578
235124
Bacillota
TGG
Pro
>WENV183021534
OLFL01019934
238910
Bacillota
CTT
Lys
>WENV183021541
OLFL01022386
114075
Bacillota
TAG
Leu
>WENV183021559
OLFL01027585
235197
Bacillota
GTC
Asp
>WENV183021566
OLFL01028957
147684
Bacillota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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