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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183373835
OLXY01005386
280500
Bacillota
TGC
Ala
>WENV183373325
OLXY01000160
280428
Bacillota
GAA
Phe
>WENV183373993
OLXY01015804
190476
Bacillota
CAT
Met
>WENV183373323
OLXY01000160
280427
Bacillota
TAC
Val
>WENV183373330
OLXY01000163
407840
Bacillota
TTC
Glu
>WENV183373914
OLXY01008536
290325
Bacillota
GCC
Gly
>WENV183373130
OLXY01000009
303718
Bacillota
TGT
Thr
>WENV183373103
OLXY01000001
317482
Bacillota
TAC
Val
>WENV183374112
OLXY01037546
35195
Bacillota
GCT
Ser
>WENV183373733
OLXY01002917
280483
Bacillota
GAA
Phe
>WENV183373750
OLXY01002985
285601
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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