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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183398252
OLZO01000273
148104
Bacillota
CAT
Met
>WENV183398259
OLZO01000294
248965
Bacillota
GCC
Gly
>WENV183398334
OLZO01000713
58712
Bacillota
CAG
Leu
>WENV183398354
OLZO01000824
411549
Bacillota
TTG
Gln
>WENV183398362
OLZO01000934
235079
Bacillota
GAA
Phe
>WENV183398368
OLZO01001022
248965
Bacillota
GCC
Gly
>WENV183398377
OLZO01001144
235098
Bacillota
GAC
Val
>WENV183398382
OLZO01001215
144583
Bacillota
ACG
Arg
>WENV183398385
OLZO01001237
148188
Bacillota
CCG
Arg
>WENV183398386
OLZO01001249
338149
Bacillota
CTC
Glu
>WENV183398387
OLZO01001249
144621
Bacillota
GTT
Asn
>WENV183398388
OLZO01001283
44854
Bacillota
TGA
Ser
>WENV183398389
OLZO01001283
4624
Bacillota
GCT
Ser
>WENV183398395
OLZO01001341
235079
Bacillota
GAA
Phe
>WENV183398393
OLZO01001341
245386
Bacillota
CCA
Trp
>WENV183398394
OLZO01001341
157838
Bacillota
GTC
Asp
>WENV183398409
OLZO01001587
245296
Bacillota
CCC
Gly
>WENV183398420
OLZO01002015
185518
Bacillota
TAC
Val
>WENV183398421
OLZO01002096
413152
Bacillota
TCC
Gly
>WENV183398427
OLZO01002133
344240
Bacillota
GCC
Gly
>WENV183398425
OLZO01002133
196632
Bacillota
GTC
Asp
>WENV183398426
OLZO01002133
245344
Bacillota
GAA
Phe
>WENV183398429
OLZO01002139
245298
Bacillota
CGG
Pro
>WENV183398428
OLZO01002139
411547
Bacillota
CTG
Gln
>WENV183398435
OLZO01002217
11034
Bacillota
GGA
Ser
>WENV183398443
OLZO01002450
338128
Bacillota
TTC
Glu
>WENV183398463
OLZO01002904
235095
Bacillota
GGT
Thr
>WENV183398467
OLZO01003065
338131
Bacillota
GCC
Gly
>WENV183398476
OLZO01003623
235124
Bacillota
TGG
Pro
>WENV183398477
OLZO01003640
80612
Bacillota
GTA
Tyr
>WENV183398478
OLZO01003691
338143
Bacillota
CTC
Glu
>WENV183398490
OLZO01004075
144672
Bacillota
TCT
Arg
>WENV183398505
OLZO01004903
144612
Bacillota
TCT
Arg
>WENV183398538
OLZO01006461
309417
Bacillota
GGC
Ala
>WENV183398552
OLZO01007182
338129
Bacillota
TGT
Thr
>WENV183398591
OLZO01012547
272992
Bacillota
CTT
Lys
>WENV183398601
OLZO01014489
235171
Bacillota
CCA
Trp
>WENV183398615
OLZO01017155
246023
Bacillota
TGC
Ala
>WENV183398614
OLZO01017155
201704
Bacillota
GAT
Ile
>WENV183398627
OLZO01020700
307003
Bacillota
TGC
Ala
>WENV183398630
OLZO01021262
37437
Bacillota
TAA
Leu
>WENV183398635
OLZO01021858
59296
Bacillota
AAG
Leu
>WENV183398648
OLZO01024596
287000
Bacillota
GTT
Asn
>WENV183398680
OLZO01036343
152492
Bacillota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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