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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183403199
OLZV01029247
343590
Bacillota
GCC
Gly
>WENV183402415
OLZV01000125
280428
Bacillota
GAA
Phe
>WENV183402426
OLZV01000138
302145
Bacillota
GAA
Phe
>WENV183402983
OLZV01009456
284746
Bacillota
CTG
Gln
>WENV183402836
OLZV01004548
175842
Bacillota
CAC
Val
>WENV183402594
OLZV01000970
190476
Bacillota
CAT
Met
>WENV183402520
OLZV01000465
280447
Bacillota
GAC
Val
>WENV183402943
OLZV01007884
5692
Bacillota
GCT
Ser
>WENV183403173
OLZV01026303
399266
Bacillota
>WENV183402892
OLZV01006077
291581
Bacillota
CGG
Pro
>WENV183402738
OLZV01002676
175859
Bacillota
TCT
Arg
>WENV183402755
OLZV01003040
175831
Bacillota
ACG
Arg
>WENV183402693
OLZV01001982
284627
Bacillota
GAA
Phe
>WENV183403272
OLZV01049745
346451
Bacillota
TTT
Lys
>WENV183402891
OLZV01006077
480322
Bacillota
CTG
Gln
>WENV183402647
OLZV01001490
175868
Bacillota
GTT
Asn
>WENV183403209
OLZV01032883
314834
Bacillota
TGC
Ala
>WENV183402379
OLZV01000051
322848
Bacillota
CTT
Lys
>WENV183402378
OLZV01000051
398854
Bacillota
CTC
Glu
>WENV183402969
OLZV01008862
291576
Bacillota
CCC
Gly
>WENV183402716
OLZV01002333
480324
Bacillota
TTG
Gln
>WENV183402507
OLZV01000401
497729
Bacillota
CCA
Trp
>WENV183402799
OLZV01003956
303718
Bacillota
TGT
Thr
>WENV183402339
OLZV01000003
56079
Bacillota
AAG
Leu
>WENV183402340
OLZV01000003
56079
Bacillota
AAG
Leu
>WENV183402899
OLZV01006534
323864
Bacillota
TGC
Ala
>WENV183402577
OLZV01000806
398857
Bacillota
TTC
Glu
>WENV183402372
OLZV01000043
117745
Bacillota
GTA
Tyr
>WENV183403040
OLZV01012168
280444
Bacillota
GGT
Thr
>WENV183403220
OLZV01036466
317482
Bacillota
TAC
Val
>WENV183402458
OLZV01000206
46643
Bacillota
TGA
Ser
>WENV183402766
OLZV01003260
179755
Bacillota
CCG
Arg
>WENV183403211
OLZV01033312
46835
Bacillota
TAA
Leu
>WENV183402813
OLZV01004090
284742
Bacillota
GAA
Phe
>WENV183402595
OLZV01000970
398832
Bacillota
TTC
Glu
>WENV183402467
OLZV01000239
280462
Bacillota
GAA
Phe
>WENV183402399
OLZV01000081
398852
Bacillota
CTC
Glu
>WENV183402448
OLZV01000163
398852
Bacillota
CTC
Glu
>WENV183402494
OLZV01000360
398852
Bacillota
CTC
Glu
>WENV183402862
OLZV01005452
280483
Bacillota
GAA
Phe
>WENV183402863
OLZV01005452
285756
Bacillota
GCC
Gly
>WENV183402830
OLZV01004374
398833
Bacillota
TGT
Thr
>WENV183402414
OLZV01000125
175849
Bacillota
GTC
Asp
>WENV183402468
OLZV01000239
280463
Bacillota
TTT
Lys
>WENV183403175
OLZV01026564
405393
Bacillota
GCC
Gly
>WENV183402942
OLZV01007884
56074
Bacillota
TGA
Ser
>WENV183402700
OLZV01002117
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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