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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183410619
OMAJ01006158
405363
Bacillota
GCA
Cys
>WENV183410618
OMAJ01006127
280428
Bacillota
GAA
Phe
>WENV183410631
OMAJ01006948
175842
Bacillota
CAC
Val
>WENV183410410
OMAJ01000381
291629
Bacillota
CCA
Trp
>WENV183410662
OMAJ01008806
295166
Bacillota
TGC
Ala
>WENV183410596
OMAJ01005259
73664
Bacillota
CAG
Leu
>WENV183410622
OMAJ01006480
5692
Bacillota
GCT
Ser
>WENV183410577
OMAJ01004385
312274
Bacillota
GGC
Ala
>WENV183410648
OMAJ01008153
186123
Bacillota
GTC
Asp
>WENV183410483
OMAJ01001388
73009
Bacillota
CAG
Leu
>WENV183410785
OMAJ01035751
291581
Bacillota
CGG
Pro
>WENV183410389
OMAJ01000280
175859
Bacillota
TCT
Arg
>WENV183410559
OMAJ01003285
175831
Bacillota
ACG
Arg
>WENV183410649
OMAJ01008153
291634
Bacillota
GAA
Phe
>WENV183410784
OMAJ01035751
480322
Bacillota
CTG
Gln
>WENV183410775
OMAJ01030902
401685
Bacillota
TTG
Gln
>WENV183410653
OMAJ01008318
175868
Bacillota
GTT
Asn
>WENV183410556
OMAJ01003256
398854
Bacillota
CTC
Glu
>WENV183410644
OMAJ01007841
291576
Bacillota
CCC
Gly
>WENV183410747
OMAJ01024200
180688
Bacillota
GTC
Asp
>WENV183410590
OMAJ01004819
56079
Bacillota
AAG
Leu
>WENV183410476
OMAJ01001278
186051
Bacillota
GAT
Ile
>WENV183410654
OMAJ01008392
280444
Bacillota
GGT
Thr
>WENV183410637
OMAJ01007403
179755
Bacillota
CCG
Arg
>WENV183410755
OMAJ01026007
46835
Bacillota
TAA
Leu
>WENV183410756
OMAJ01026477
398832
Bacillota
TTC
Glu
>WENV183410669
OMAJ01009447
398852
Bacillota
CTC
Glu
>WENV183410722
OMAJ01017027
289123
Bacillota
GGT
Thr
>WENV183410774
OMAJ01030902
175857
Bacillota
GTG
His
>WENV183410605
OMAJ01005487
398833
Bacillota
TGT
Thr
>WENV183410710
OMAJ01015737
280486
Bacillota
TGC
Ala
>WENV183410650
OMAJ01008153
405393
Bacillota
GCC
Gly
>WENV183410621
OMAJ01006480
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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