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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183411324
OMAL01000006
154063
Bacillota
CGG
Pro
>WENV183411410
OMAL01000050
414486
Bacillota
CCC
Gly
>WENV183411415
OMAL01000055
37071
Bacillota
TGA
Ser
>WENV183411413
OMAL01000055
235114
Bacillota
TTT
Lys
>WENV183411412
OMAL01000055
235113
Bacillota
GAA
Phe
>WENV183411463
OMAL01000130
338147
Bacillota
CTC
Glu
>WENV183411462
OMAL01000130
95563
Bacillota
GTA
Tyr
>WENV183411479
OMAL01000165
235142
Bacillota
CTT
Lys
>WENV183411487
OMAL01000173
338147
Bacillota
CTC
Glu
>WENV183411493
OMAL01000202
338147
Bacillota
CTC
Glu
>WENV183411494
OMAL01000203
235142
Bacillota
CTT
Lys
>WENV183411528
OMAL01000268
307003
Bacillota
TGC
Ala
>WENV183411546
OMAL01000322
144610
Bacillota
GTG
His
>WENV183411571
OMAL01000426
235134
Bacillota
GAA
Phe
>WENV183411572
OMAL01000426
240017
Bacillota
GCC
Gly
>WENV183411569
OMAL01000426
263765
Bacillota
TAC
Val
>WENV183411606
OMAL01000554
44859
Bacillota
AAG
Leu
>WENV183411633
OMAL01000688
147684
Bacillota
ACG
Arg
>WENV183411637
OMAL01000717
144612
Bacillota
TCT
Arg
>WENV183411642
OMAL01000723
152149
Bacillota
GTG
His
>WENV183411666
OMAL01000889
144583
Bacillota
ACG
Arg
>WENV183411697
OMAL01001145
344240
Bacillota
GCC
Gly
>WENV183411698
OMAL01001146
114075
Bacillota
TAG
Leu
>WENV183411709
OMAL01001319
144594
Bacillota
CAC
Val
>WENV183411720
OMAL01001392
235098
Bacillota
GAC
Val
>WENV183411721
OMAL01001423
235124
Bacillota
TGG
Pro
>WENV183411741
OMAL01001745
44854
Bacillota
TGA
Ser
>WENV183411742
OMAL01001745
4624
Bacillota
GCT
Ser
>WENV183411769
OMAL01002143
411549
Bacillota
TTG
Gln
>WENV183411773
OMAL01002187
11034
Bacillota
GGA
Ser
>WENV183411820
OMAL01002674
245298
Bacillota
CGG
Pro
>WENV183411819
OMAL01002674
411547
Bacillota
CTG
Gln
>WENV183411835
OMAL01002973
338149
Bacillota
CTC
Glu
>WENV183411836
OMAL01002973
272992
Bacillota
CTT
Lys
>WENV183411839
OMAL01003089
152492
Bacillota
GGG
Pro
>WENV183411850
OMAL01003645
277200
Bacillota
GGC
Ala
>WENV183411852
OMAL01003669
235117
Bacillota
TAC
Val
>WENV183411862
OMAL01003836
144621
Bacillota
GTT
Asn
>WENV183411874
OMAL01004028
298639
Bacillota
GTT
Asn
>WENV183411876
OMAL01004031
59312
Bacillota
CAG
Leu
>WENV183411875
OMAL01004031
44859
Bacillota
AAG
Leu
>WENV183411885
OMAL01004325
196621
Bacillota
GTC
Asp
>WENV183411884
OMAL01004325
304022
Bacillota
GCC
Gly
>WENV183411883
OMAL01004325
235079
Bacillota
GAA
Phe
>WENV183411886
OMAL01004325
235095
Bacillota
GGT
Thr
>WENV183411893
OMAL01004486
58712
Bacillota
CAG
Leu
>WENV183411899
OMAL01004564
338128
Bacillota
TTC
Glu
>WENV183411914
OMAL01005167
238910
Bacillota
CTT
Lys
>WENV183411927
OMAL01005664
247734
Bacillota
TGC
Ala
>WENV183411937
OMAL01006005
196632
Bacillota
GTC
Asp
>WENV183411938
OMAL01006005
245344
Bacillota
GAA
Phe
>WENV183411972
OMAL01007700
37269
Bacillota
TGA
Ser
>WENV183411976
OMAL01007753
412387
Bacillota
GCA
Cys
>WENV183411995
OMAL01009336
235150
Bacillota
TGC
Ala
>WENV183412012
OMAL01010703
148188
Bacillota
CCG
Arg
>WENV183412024
OMAL01011763
313454
Bacillota
GAA
Phe
>WENV183412026
OMAL01011983
338129
Bacillota
TGT
Thr
>WENV183412058
OMAL01014366
245296
Bacillota
CCC
Gly
>WENV183412096
OMAL01019128
429429
Bacillota
CCA
Trp
>WENV183412100
OMAL01019494
41154
Bacillota
TAA
Leu
>WENV183412117
OMAL01023557
155089
Bacillota
CAT
Met
>WENV183412154
OMAL01034291
313104
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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