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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183481225
OMFK01000005
280427
Bacillota
TAC
Val
>WENV183481227
OMFK01000005
280428
Bacillota
GAA
Phe
>WENV183481465
OMFK01000264
190476
Bacillota
CAT
Met
>WENV183481466
OMFK01000264
398832
Bacillota
TTC
Glu
>WENV183481490
OMFK01000328
118669
Bacillota
GTA
Tyr
>WENV183481531
OMFK01000571
179755
Bacillota
CCG
Arg
>WENV183481599
OMFK01001150
349107
Bacillota
GCC
Gly
>WENV183481600
OMFK01001150
280466
Bacillota
TAC
Val
>WENV183481622
OMFK01001331
280473
Bacillota
TGG
Pro
>WENV183481636
OMFK01001592
303718
Bacillota
TGT
Thr
>WENV183481689
OMFK01002522
398852
Bacillota
CTC
Glu
>WENV183481740
OMFK01003966
398854
Bacillota
CTC
Glu
>WENV183481761
OMFK01004779
73009
Bacillota
CAG
Leu
>WENV183481825
OMFK01010588
480322
Bacillota
CTG
Gln
>WENV183481826
OMFK01010588
291581
Bacillota
CGG
Pro
>WENV183481900
OMFK01019326
179176
Bacillota
ACG
Arg
>WENV183481904
OMFK01019808
323864
Bacillota
TGC
Ala
>WENV183481910
OMFK01021257
332181
Bacillota
TGT
Thr
>WENV183481918
OMFK01022855
186123
Bacillota
GTC
Asp
>WENV183481923
OMFK01023650
280476
Bacillota
TTT
Lys
>WENV183481926
OMFK01024498
175859
Bacillota
TCT
Arg
>WENV183481928
OMFK01024522
175831
Bacillota
ACG
Arg
>WENV183481938
OMFK01025678
291634
Bacillota
GAA
Phe
>WENV183481945
OMFK01026788
292374
Bacillota
TGC
Ala
>WENV183481960
OMFK01031344
184497
Bacillota
GGG
Pro
>WENV183481964
OMFK01032472
175868
Bacillota
GTT
Asn
>WENV183481967
OMFK01034094
175911
Bacillota
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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