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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183655845
OQWE01000685
344240
Bacillota
GCC
Gly
>WENV183655887
OQWE01001046
58712
Bacillota
CAG
Leu
>WENV183655907
OQWE01001269
154711
Bacillota
TGG
Pro
>WENV183655921
OQWE01001461
248965
Bacillota
GCC
Gly
>WENV183655922
OQWE01001464
352996
Bacillota
TTC
Glu
>WENV183655979
OQWE01002414
243098
Bacillota
GGT
Thr
>WENV183655995
OQWE01002911
248683
Bacillota
TTT
Lys
>WENV183656015
OQWE01003254
274189
Bacillota
TGT
Thr
>WENV183656031
OQWE01003444
144621
Bacillota
GTT
Asn
>WENV183656072
OQWE01004563
44854
Bacillota
TGA
Ser
>WENV183656073
OQWE01004563
4624
Bacillota
GCT
Ser
>WENV183656078
OQWE01005035
235098
Bacillota
GAC
Val
>WENV183656084
OQWE01005216
274189
Bacillota
TGT
Thr
>WENV183656106
OQWE01005941
249522
Bacillota
TAC
Val
>WENV183656109
OQWE01005941
248965
Bacillota
GCC
Gly
>WENV183656147
OQWE01006950
338149
Bacillota
CTC
Glu
>WENV183656148
OQWE01006950
272992
Bacillota
CTT
Lys
>WENV183656152
OQWE01007190
235079
Bacillota
GAA
Phe
>WENV183656155
OQWE01007307
247734
Bacillota
TGC
Ala
>WENV183656157
OQWE01007404
338128
Bacillota
TTC
Glu
>WENV183656181
OQWE01008333
339630
Bacillota
GCC
Gly
>WENV183656196
OQWE01008971
273862
Bacillota
TGC
Ala
>WENV183656244
OQWE01011723
144583
Bacillota
ACG
Arg
>WENV183656261
OQWE01013108
144594
Bacillota
CAC
Val
>WENV183656264
OQWE01013189
245298
Bacillota
CGG
Pro
>WENV183656263
OQWE01013189
411547
Bacillota
CTG
Gln
>WENV183656283
OQWE01014290
338128
Bacillota
TTC
Glu
>WENV183656316
OQWE01017423
413152
Bacillota
TCC
Gly
>WENV183656325
OQWE01017969
163943
Bacillota
GTC
Asp
>WENV183656349
OQWE01020280
235171
Bacillota
CCA
Trp
>WENV183656350
OQWE01020321
11034
Bacillota
GGA
Ser
>WENV183656409
OQWE01025719
250201
Bacillota
TGC
Ala
>WENV183656423
OQWE01027949
338129
Bacillota
TGT
Thr
>WENV183656439
OQWE01030752
411549
Bacillota
TTG
Gln
>WENV183656462
OQWE01033055
235095
Bacillota
GGT
Thr
>WENV183656469
OQWE01033788
235095
Bacillota
GGT
Thr
>WENV183656507
OQWE01039681
59312
Bacillota
CAG
Leu
>WENV183656526
OQWE01043391
155089
Bacillota
CAT
Met
>WENV183656528
OQWE01043872
37269
Bacillota
TGA
Ser
>WENV183656575
OQWE01053560
157635
Bacillota
TCT
Arg
>WENV183656580
OQWE01054967
147684
Bacillota
ACG
Arg
>WENV183656589
OQWE01057252
247057
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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