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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183723004
PDYJ01000024
237957
Bacillota
GTT
Asn
>WENV183723261
PDYJ01000841
240192
Bacillota
CTG
Gln
>WENV183723255
PDYJ01000822
147487
Bacillota
ACG
Arg
>WENV183723481
PDYJ01001869
147487
Bacillota
ACG
Arg
>WENV183722997
PDYJ01000008
277175
Bacillota
CTT
Lys
>WENV183723426
PDYJ01001564
277175
Bacillota
CTT
Lys
>WENV183723427
PDYJ01001564
277175
Bacillota
CTT
Lys
>WENV183723007
PDYJ01000024
237265
Bacillota
TAC
Val
>WENV183723250
PDYJ01000822
237265
Bacillota
TAC
Val
>WENV183723476
PDYJ01001869
237265
Bacillota
TAC
Val
>WENV183723508
PDYJ01002172
16359
Bacillota
CGA
Ser
>WENV183723787
PDYJ01003166
16359
Bacillota
CGA
Ser
>WENV183723312
PDYJ01001504
144668
Bacillota
GTC
Asp
>WENV183723492
PDYJ01001869
339151
Bacillota
TTC
Glu
>WENV183723006
PDYJ01000024
339151
Bacillota
TTC
Glu
>WENV183723488
PDYJ01001869
238151
Bacillota
>WENV183723754
PDYJ01003095
96360
Bacillota
GTA
Tyr
>WENV183723047
PDYJ01000072
96360
Bacillota
GTA
Tyr
>WENV183723804
PDYJ01003493
256115
Bacillota
CGT
Thr
>WENV183723045
PDYJ01000072
240098
Bacillota
GTC
Asp
>WENV183723011
PDYJ01000024
237266
Bacillota
GTG
His
>WENV183723477
PDYJ01001869
240190
Bacillota
TTT
Lys
>WENV183723100
PDYJ01000586
239812
Bacillota
CCT
Arg
>WENV183723043
PDYJ01000072
339391
Bacillota
TTC
Glu
>WENV183723009
PDYJ01000024
85288
Bacillota
GTA
Tyr
>WENV183723236
PDYJ01000789
147276
Bacillota
CCT
Arg
>WENV183723452
PDYJ01001682
157838
Bacillota
GTC
Asp
>WENV183723494
PDYJ01001869
279755
Bacillota
GTC
Asp
>WENV183723487
PDYJ01001869
279755
Bacillota
GTC
Asp
>WENV183723008
PDYJ01000024
279755
Bacillota
GTC
Asp
>WENV183723667
PDYJ01002804
247734
Bacillota
TGC
Ala
>WENV183723644
PDYJ01002500
247734
Bacillota
TGC
Ala
>WENV183723086
PDYJ01000361
247734
Bacillota
TGC
Ala
>WENV183723485
PDYJ01001869
6950
Bacillota
TGA
Ser
>WENV183723478
PDYJ01001869
247849
Bacillota
TGT
Thr
>WENV183723252
PDYJ01000822
247849
Bacillota
TGT
Thr
>WENV183723491
PDYJ01001869
16595
Bacillota
GCT
Ser
>WENV183723005
PDYJ01000024
3271
Bacillota
GGA
Ser
>WENV183723010
PDYJ01000024
412118
Bacillota
>WENV183723496
PDYJ01001869
45160
Bacillota
CAA
Leu
>WENV183723014
PDYJ01000024
45160
Bacillota
CAA
Leu
>WENV183723750
PDYJ01003095
7065
Bacillota
GCT
Ser
>WENV183723042
PDYJ01000072
7065
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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