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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV080041
AATO01001869
97610
Bacteroidota
GTA
Tyr
>WENV080063
AATO01002909
47714
Bacteroidota
TGA
Ser
>WENV080069
AATO01003273
166688
Bacteroidota
GTC
Asp
>WENV080101
AATO01004917
154774
Bacteroidota
GAT
Ile
>WENV080117
AATO01006382
191853
Bacteroidota
TCG
Arg
>WENV080129
AATO01007873
296886
Bacteroidota
>WENV080131
AATO01008091
61800
Bacteroidota
TAA
Leu
>WENV080150
AATO01009308
24425
Bacteroidota
GCT
Ser
>WENV080152
AATO01009308
146963
Bacteroidota
TCT
Arg
>WENV080171
AATO01010939
45130
Bacteroidota
TGA
Ser
>WENV080186
AATO01011352
285949
Bacteroidota
GCC
Gly
>WENV080190
AATO01011644
61800
Bacteroidota
TAA
Leu
>WENV080191
AATO01011644
238670
Bacteroidota
GCC
Gly
>WENV080215
AATO01013299
147942
Bacteroidota
GTC
Asp
>WENV080216
AATO01013299
147942
Bacteroidota
GTC
Asp
>WENV080221
AATO01013629
237606
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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