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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
157 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170026595
CDTY01000014
186108
Bacteroidota
GTT
Asn
>WENV170026596
CDTY01000014
186108
Bacteroidota
GTT
Asn
>WENV170026597
CDTY01000016
183889
Bacteroidota
GGC
Ala
>WENV170026599
CDTY01000023
56493
Bacteroidota
TGA
Ser
>WENV170026613
CDTY01000829
351598
Bacteroidota
CGG
Pro
>WENV170026630
CDTY01001261
365112
Bacteroidota
TTT
Lys
>WENV170026644
CDTY01001813
175844
Bacteroidota
GGC
Ala
>WENV170026706
CDTY01004058
280446
Bacteroidota
TTT
Lys
>WENV170026732
CDTY01005661
351598
Bacteroidota
CGG
Pro
>WENV170026741
CDTY01005757
398836
Bacteroidota
GCA
Cys
>WENV170026745
CDTY01005792
398860
Bacteroidota
CTC
Glu
>WENV170026755
CDTY01006223
285750
Bacteroidota
CCC
Gly
>WENV170026777
CDTY01006683
280478
Bacteroidota
GCC
Gly
>WENV170026779
CDTY01006683
280478
Bacteroidota
GCC
Gly
>WENV170026785
CDTY01006705
186108
Bacteroidota
GTT
Asn
>WENV170026786
CDTY01006705
186108
Bacteroidota
GTT
Asn
>WENV170026787
CDTY01006705
186108
Bacteroidota
GTT
Asn
>WENV170026798
CDTY01007152
182267
Bacteroidota
GTT
Asn
>WENV170026799
CDTY01007152
182267
Bacteroidota
GTT
Asn
>WENV170026800
CDTY01007152
182267
Bacteroidota
GTT
Asn
>WENV170026801
CDTY01007152
182267
Bacteroidota
GTT
Asn
>WENV170026802
CDTY01007152
182267
Bacteroidota
GTT
Asn
>WENV170026804
CDTY01007599
484496
Bacteroidota
TTG
Gln
>WENV170026807
CDTY01007607
484496
Bacteroidota
TTG
Gln
>WENV170026824
CDTY01008448
20492
Bacteroidota
GGA
Ser
>WENV170026826
CDTY01008466
418894
Bacteroidota
TTC
Glu
>WENV170026828
CDTY01008473
57807
Bacteroidota
TGA
Ser
>WENV170026831
CDTY01008540
351598
Bacteroidota
CGG
Pro
>WENV170026839
CDTY01008933
29791
Bacteroidota
GCT
Ser
>WENV170026840
CDTY01008933
398860
Bacteroidota
CTC
Glu
>WENV170026866
CDTY01009807
20206
Bacteroidota
GGA
Ser
>WENV170026865
CDTY01009807
488746
Bacteroidota
CTG
Gln
>WENV170026864
CDTY01009807
158068
Bacteroidota
GGG
Pro
>WENV170026875
CDTY01010253
57807
Bacteroidota
TGA
Ser
>WENV170026882
CDTY01010658
351598
Bacteroidota
CGG
Pro
>WENV170026904
CDTY01011118
56072
Bacteroidota
TAA
Leu
>WENV170026936
CDTY01012419
365112
Bacteroidota
TTT
Lys
>WENV170026940
CDTY01012855
280478
Bacteroidota
GCC
Gly
>WENV170026942
CDTY01012859
56493
Bacteroidota
TGA
Ser
>WENV170026943
CDTY01012859
57807
Bacteroidota
TGA
Ser
>WENV170026946
CDTY01012881
140771
Bacteroidota
>WENV170026949
CDTY01012881
140771
Bacteroidota
>WENV170026953
CDTY01012895
398836
Bacteroidota
GCA
Cys
>WENV170026956
CDTY01013142
365112
Bacteroidota
TTT
Lys
>WENV170026983
CDTY01014597
182267
Bacteroidota
GTT
Asn
>WENV170026984
CDTY01014597
182267
Bacteroidota
GTT
Asn
>WENV170026985
CDTY01014599
399200
Bacteroidota
CAT
Met
>WENV170027017
CDTY01015534
483416
Bacteroidota
CTG
Gln
>WENV170027021
CDTY01015672
280532
Bacteroidota
>WENV170027028
CDTY01016361
158068
Bacteroidota
GGG
Pro
>WENV170027037
CDTY01016758
398836
Bacteroidota
GCA
Cys
>WENV170027040
CDTY01016864
175904
Bacteroidota
CGG
Pro
>WENV170027047
CDTY01017248
398860
Bacteroidota
CTC
Glu
>WENV170027057
CDTY01017697
56493
Bacteroidota
TGA
Ser
>WENV170027059
CDTY01017697
140771
Bacteroidota
>WENV170027062
CDTY01017697
140771
Bacteroidota
>WENV170027065
CDTY01017697
140771
Bacteroidota
>WENV170027067
CDTY01017697
140771
Bacteroidota
>WENV170027084
CDTY01017726
21127
Bacteroidota
GGA
Ser
>WENV170027087
CDTY01017749
280530
Bacteroidota
CCA
Trp
>WENV170027094
CDTY01018220
291612
Bacteroidota
>WENV170027116
CDTY01019001
398836
Bacteroidota
GCA
Cys
>WENV170027117
CDTY01019001
398836
Bacteroidota
GCA
Cys
>WENV170027148
CDTY01019880
399200
Bacteroidota
CAT
Met
>WENV170027163
CDTY01020303
203954
Bacteroidota
GTC
Asp
>WENV170027171
CDTY01020757
484496
Bacteroidota
TTG
Gln
>WENV170027181
CDTY01021193
175886
Bacteroidota
GGC
Ala
>WENV170027224
CDTY01023284
398836
Bacteroidota
GCA
Cys
>WENV170027230
CDTY01023291
365112
Bacteroidota
TTT
Lys
>WENV170027236
CDTY01023676
187400
Bacteroidota
GTT
Asn
>WENV170027237
CDTY01023676
187400
Bacteroidota
GTT
Asn
>WENV170027246
CDTY01024033
351598
Bacteroidota
CGG
Pro
>WENV170027252
CDTY01024134
158068
Bacteroidota
GGG
Pro
>WENV170027265
CDTY01024592
280478
Bacteroidota
GCC
Gly
>WENV170027284
CDTY01025039
351598
Bacteroidota
CGG
Pro
>WENV170027289
CDTY01025450
183889
Bacteroidota
GGC
Ala
>WENV170027304
CDTY01026046
398871
Bacteroidota
TTC
Glu
>WENV170027306
CDTY01026106
488746
Bacteroidota
CTG
Gln
>WENV170027322
CDTY01027388
186142
Bacteroidota
GAT
Ile
>WENV170027323
CDTY01027388
186143
Bacteroidota
TGC
Ala
>WENV170027338
CDTY01027905
484496
Bacteroidota
TTG
Gln
>WENV170027345
CDTY01027945
484496
Bacteroidota
TTG
Gln
>WENV170027348
CDTY01028047
158068
Bacteroidota
GGG
Pro
>WENV170027351
CDTY01028306
99847
Bacteroidota
GTA
Tyr
>WENV170027357
CDTY01028355
57645
Bacteroidota
TGA
Ser
>WENV170027363
CDTY01028363
175838
Bacteroidota
GTT
Asn
>WENV170027364
CDTY01028363
175838
Bacteroidota
GTT
Asn
>WENV170027365
CDTY01028363
175838
Bacteroidota
GTT
Asn
>WENV170027360
CDTY01028363
99847
Bacteroidota
GTA
Tyr
>WENV170027368
CDTY01028779
117741
Bacteroidota
TAG
Leu
>WENV170027369
CDTY01028783
201819
Bacteroidota
CAT
Met
>WENV170027380
CDTY01028851
280478
Bacteroidota
GCC
Gly
>WENV170027399
CDTY01029722
398836
Bacteroidota
GCA
Cys
>WENV170027465
CDTY01031939
365112
Bacteroidota
TTT
Lys
>WENV170027471
CDTY01032660
398871
Bacteroidota
TTC
Glu
>WENV170027472
CDTY01032660
398871
Bacteroidota
TTC
Glu
>WENV170027487
CDTY01033208
99847
Bacteroidota
GTA
Tyr
>WENV170027492
CDTY01033660
99847
Bacteroidota
GTA
Tyr
>WENV170027494
CDTY01033662
398836
Bacteroidota
GCA
Cys
>WENV170027501
CDTY01033681
175902
Bacteroidota
GGC
Ala
>WENV170027503
CDTY01033696
280532
Bacteroidota
>WENV170027507
CDTY01034081
57807
Bacteroidota
TGA
Ser
>WENV170027527
CDTY01035244
480404
Bacteroidota
TTG
Gln
>WENV170027539
CDTY01035760
179697
Bacteroidota
TGT
Thr
>WENV170027557
CDTY01036158
56072
Bacteroidota
TAA
Leu
>WENV170027573
CDTY01037433
484496
Bacteroidota
TTG
Gln
>WENV170027586
CDTY01038300
280557
Bacteroidota
CAT
Met
>WENV170027587
CDTY01038305
20449
Bacteroidota
GGA
Ser
>WENV170027596
CDTY01038684
186874
Bacteroidota
CAT
Met
>WENV170027599
CDTY01038773
56493
Bacteroidota
TGA
Ser
>WENV170027600
CDTY01038773
175903
Bacteroidota
GTG
His
>WENV170027610
CDTY01038801
398836
Bacteroidota
GCA
Cys
>WENV170027621
CDTY01039644
280446
Bacteroidota
TTT
Lys
>WENV170027625
CDTY01040057
280446
Bacteroidota
TTT
Lys
>WENV170027664
CDTY01040936
398828
Bacteroidota
CCG
Arg
>WENV170027668
CDTY01041358
484496
Bacteroidota
TTG
Gln
>WENV170027676
CDTY01041361
186874
Bacteroidota
CAT
Met
>WENV170027740
CDTY01043596
280446
Bacteroidota
TTT
Lys
>WENV170027754
CDTY01044084
282712
Bacteroidota
TTT
Lys
>WENV170027760
CDTY01044117
159415
Bacteroidota
TAC
Val
>WENV170027761
CDTY01044117
159415
Bacteroidota
TAC
Val
>WENV170027775
CDTY01044949
182267
Bacteroidota
GTT
Asn
>WENV170027776
CDTY01044953
188555
Bacteroidota
CAT
Met
>WENV170027787
CDTY01045368
289031
Bacteroidota
CAT
Met
>WENV170027790
CDTY01045535
480404
Bacteroidota
TTG
Gln
>WENV170027797
CDTY01045695
351598
Bacteroidota
CGG
Pro
>WENV170027806
CDTY01045705
398836
Bacteroidota
GCA
Cys
>WENV170027811
CDTY01046170
365112
Bacteroidota
TTT
Lys
>WENV170027822
CDTY01046613
20766
Bacteroidota
GGA
Ser
>WENV170027834
CDTY01047079
176192
Bacteroidota
TCT
Arg
>WENV170027835
CDTY01047104
176192
Bacteroidota
TCT
Arg
>WENV170027845
CDTY01047468
280451
Bacteroidota
CGT
Thr
>WENV170027846
CDTY01047479
398836
Bacteroidota
GCA
Cys
>WENV170027852
CDTY01047960
175904
Bacteroidota
CGG
Pro
>WENV170027855
CDTY01047981
280515
Bacteroidota
CCA
Trp
>WENV170027866
CDTY01048329
351598
Bacteroidota
CGG
Pro
>WENV170027876
CDTY01048776
399200
Bacteroidota
CAT
Met
>WENV170027880
CDTY01048927
280515
Bacteroidota
CCA
Trp
>WENV170027890
CDTY01049235
176192
Bacteroidota
TCT
Arg
>WENV170027897
CDTY01049624
280446
Bacteroidota
TTT
Lys
>WENV170027898
CDTY01049632
280557
Bacteroidota
CAT
Met
>WENV170027913
CDTY01050052
56072
Bacteroidota
TAA
Leu
>WENV170027948
CDTY01051530
57807
Bacteroidota
TGA
Ser
>WENV170027958
CDTY01051891
365112
Bacteroidota
TTT
Lys
>WENV170027967
CDTY01052316
158068
Bacteroidota
GGG
Pro
>WENV170027972
CDTY01052708
140771
Bacteroidota
>WENV170027975
CDTY01052708
140771
Bacteroidota
>WENV170027978
CDTY01052708
140771
Bacteroidota
>WENV170027980
CDTY01052708
140771
Bacteroidota
>WENV170027985
CDTY01052771
280557
Bacteroidota
CAT
Met
>WENV170027986
CDTY01052771
280557
Bacteroidota
CAT
Met
>WENV170027998
CDTY01053234
289031
Bacteroidota
CAT
Met
>WENV170028004
CDTY01053581
322836
Bacteroidota
CGT
Thr
>WENV170028022
CDTY01054072
480404
Bacteroidota
TTG
Gln
>WENV170028030
CDTY01054516
99847
Bacteroidota
GTA
Tyr
>WENV170028045
CDTY01054987
57807
Bacteroidota
TGA
Ser
>WENV170028047
CDTY01054992
118089
Bacteroidota
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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