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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170031763
CDYJ01013227
73011
Bacteroidota
CAA
Leu
>WENV170031849
CDYJ01019500
74084
Bacteroidota
CAG
Leu
>WENV170032090
CDYJ01035602
74084
Bacteroidota
CAG
Leu
>WENV170032293
CDYJ01050210
289031
Bacteroidota
CAT
Met
>WENV170031724
CDYJ01010754
399200
Bacteroidota
CAT
Met
>WENV170031762
CDYJ01013191
399200
Bacteroidota
CAT
Met
>WENV170031892
CDYJ01022274
399200
Bacteroidota
CAT
Met
>WENV170031934
CDYJ01025158
399200
Bacteroidota
CAT
Met
>WENV170031645
CDYJ01006072
186874
Bacteroidota
CAT
Met
>WENV170031776
CDYJ01014784
186874
Bacteroidota
CAT
Met
>WENV170031803
CDYJ01016522
280530
Bacteroidota
CCA
Trp
>WENV170031827
CDYJ01018555
285750
Bacteroidota
CCC
Gly
>WENV170032231
CDYJ01045287
285750
Bacteroidota
CCC
Gly
>WENV170032287
CDYJ01049829
285750
Bacteroidota
CCC
Gly
>WENV170031620
CDYJ01004754
398829
Bacteroidota
CCT
Arg
>WENV170031772
CDYJ01014351
398829
Bacteroidota
CCT
Arg
>WENV170031914
CDYJ01023482
398829
Bacteroidota
CCT
Arg
>WENV170031940
CDYJ01025773
398829
Bacteroidota
CCT
Arg
>WENV170031981
CDYJ01028202
398829
Bacteroidota
CCT
Arg
>WENV170031978
CDYJ01028090
404226
Bacteroidota
CCT
Arg
>WENV170031802
CDYJ01016522
175904
Bacteroidota
CGG
Pro
>WENV170031896
CDYJ01022522
175904
Bacteroidota
CGG
Pro
>WENV170031694
CDYJ01008713
398860
Bacteroidota
CTC
Glu
>WENV170031690
CDYJ01008702
483416
Bacteroidota
CTG
Gln
>WENV170031704
CDYJ01009501
480325
Bacteroidota
CTG
Gln
>WENV170031705
CDYJ01009501
480325
Bacteroidota
CTG
Gln
>WENV170031706
CDYJ01009501
480325
Bacteroidota
CTG
Gln
>WENV170031707
CDYJ01009501
480325
Bacteroidota
CTG
Gln
>WENV170032212
CDYJ01044464
480325
Bacteroidota
CTG
Gln
>WENV170032259
CDYJ01047751
480325
Bacteroidota
CTG
Gln
>WENV170032260
CDYJ01047751
480325
Bacteroidota
CTG
Gln
>WENV170032261
CDYJ01047751
480325
Bacteroidota
CTG
Gln
>WENV170032262
CDYJ01047751
480325
Bacteroidota
CTG
Gln
>WENV170031899
CDYJ01022624
186142
Bacteroidota
GAT
Ile
>WENV170031747
CDYJ01012394
398836
Bacteroidota
GCA
Cys
>WENV170031752
CDYJ01012785
398836
Bacteroidota
GCA
Cys
>WENV170031860
CDYJ01020071
398836
Bacteroidota
GCA
Cys
>WENV170031877
CDYJ01021345
398836
Bacteroidota
GCA
Cys
>WENV170031889
CDYJ01022246
398836
Bacteroidota
GCA
Cys
>WENV170032048
CDYJ01032548
398836
Bacteroidota
GCA
Cys
>WENV170032111
CDYJ01036350
398836
Bacteroidota
GCA
Cys
>WENV170031592
CDYJ01003247
280478
Bacteroidota
GCC
Gly
>WENV170031594
CDYJ01003247
280478
Bacteroidota
GCC
Gly
>WENV170031596
CDYJ01003247
280478
Bacteroidota
GCC
Gly
>WENV170031725
CDYJ01010757
280478
Bacteroidota
GCC
Gly
>WENV170031848
CDYJ01019500
280478
Bacteroidota
GCC
Gly
>WENV170031966
CDYJ01027302
280478
Bacteroidota
GCC
Gly
>WENV170031968
CDYJ01027302
280478
Bacteroidota
GCC
Gly
>WENV170031970
CDYJ01027302
280478
Bacteroidota
GCC
Gly
>WENV170031693
CDYJ01008713
29791
Bacteroidota
GCT
Ser
>WENV170031815
CDYJ01017729
20449
Bacteroidota
GGA
Ser
>WENV170031960
CDYJ01027302
20449
Bacteroidota
GGA
Ser
>WENV170032183
CDYJ01042421
20449
Bacteroidota
GGA
Ser
>WENV170031601
CDYJ01003699
183889
Bacteroidota
GGC
Ala
>WENV170031699
CDYJ01009088
158068
Bacteroidota
GGG
Pro
>WENV170031561
CDYJ01000775
400088
Bacteroidota
GGT
Thr
>WENV170032177
CDYJ01041990
400088
Bacteroidota
GGT
Thr
>WENV170031948
CDYJ01026063
99847
Bacteroidota
GTA
Tyr
>WENV170032123
CDYJ01037185
203954
Bacteroidota
GTC
Asp
>WENV170032159
CDYJ01040740
203954
Bacteroidota
GTC
Asp
>WENV170032151
CDYJ01040414
175906
Bacteroidota
GTG
His
>WENV170032152
CDYJ01040414
175906
Bacteroidota
GTG
His
>WENV170032153
CDYJ01040414
175906
Bacteroidota
GTG
His
>WENV170031823
CDYJ01018267
159415
Bacteroidota
TAC
Val
>WENV170031824
CDYJ01018267
159415
Bacteroidota
TAC
Val
>WENV170031825
CDYJ01018267
159415
Bacteroidota
TAC
Val
>WENV170031610
CDYJ01004102
118089
Bacteroidota
TAG
Leu
>WENV170031830
CDYJ01018563
118089
Bacteroidota
TAG
Leu
>WENV170031906
CDYJ01022738
118089
Bacteroidota
TAG
Leu
>WENV170031564
CDYJ01001162
178907
Bacteroidota
TCT
Arg
>WENV170032286
CDYJ01049826
178907
Bacteroidota
TCT
Arg
>WENV170032288
CDYJ01049829
178907
Bacteroidota
TCT
Arg
>WENV170032125
CDYJ01037542
176192
Bacteroidota
TCT
Arg
>WENV170031578
CDYJ01001913
57807
Bacteroidota
TGA
Ser
>WENV170031983
CDYJ01028293
57807
Bacteroidota
TGA
Ser
>WENV170032006
CDYJ01029464
57807
Bacteroidota
TGA
Ser
>WENV170032058
CDYJ01033571
57807
Bacteroidota
TGA
Ser
>WENV170032296
CDYJ01050329
57807
Bacteroidota
TGA
Ser
>WENV170031900
CDYJ01022624
186143
Bacteroidota
TGC
Ala
>WENV170031979
CDYJ01028090
398871
Bacteroidota
TTC
Glu
>WENV170031980
CDYJ01028090
398871
Bacteroidota
TTC
Glu
>WENV170031711
CDYJ01009871
480404
Bacteroidota
TTG
Gln
>WENV170031874
CDYJ01021286
480404
Bacteroidota
TTG
Gln
>WENV170032120
CDYJ01037119
484496
Bacteroidota
TTG
Gln
>WENV170032307
CDYJ01051379
484496
Bacteroidota
TTG
Gln
>WENV170032013
CDYJ01030658
285360
Bacteroidota
TTT
Lys
>WENV170031697
CDYJ01008937
280553
Bacteroidota
TTT
Lys
>WENV170031779
CDYJ01015948
280553
Bacteroidota
TTT
Lys
>WENV170031621
CDYJ01004893
280446
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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