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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170034745
CDYL01019859
398829
Bacteroidota
CCT
Arg
>WENV170034389
CDYL01001624
175904
Bacteroidota
CGG
Pro
>WENV170034543
CDYL01009081
289031
Bacteroidota
CAT
Met
>WENV170034979
CDYL01030656
20492
Bacteroidota
GGA
Ser
>WENV170034760
CDYL01020620
282712
Bacteroidota
TTT
Lys
>WENV170034857
CDYL01025543
282712
Bacteroidota
TTT
Lys
>WENV170035022
CDYL01032486
118089
Bacteroidota
TAG
Leu
>WENV170034413
CDYL01002758
203954
Bacteroidota
GTC
Asp
>WENV170034754
CDYL01020620
203954
Bacteroidota
GTC
Asp
>WENV170034860
CDYL01025543
203954
Bacteroidota
GTC
Asp
>WENV170034829
CDYL01024473
29791
Bacteroidota
GCT
Ser
>WENV170034952
CDYL01028860
29791
Bacteroidota
GCT
Ser
>WENV170034440
CDYL01004308
20449
Bacteroidota
GGA
Ser
>WENV170034755
CDYL01020620
20449
Bacteroidota
GGA
Ser
>WENV170034861
CDYL01025543
20449
Bacteroidota
GGA
Ser
>WENV170034373
CDYL01000195
57807
Bacteroidota
TGA
Ser
>WENV170034377
CDYL01000955
57807
Bacteroidota
TGA
Ser
>WENV170034548
CDYL01009602
57807
Bacteroidota
TGA
Ser
>WENV170034740
CDYL01019848
57807
Bacteroidota
TGA
Ser
>WENV170034830
CDYL01024473
398860
Bacteroidota
CTC
Glu
>WENV170034953
CDYL01028860
398860
Bacteroidota
CTC
Glu
>WENV170034963
CDYL01029591
99847
Bacteroidota
GTA
Tyr
>WENV170034960
CDYL01029381
399200
Bacteroidota
CAT
Met
>WENV170034961
CDYL01029381
399200
Bacteroidota
CAT
Met
>WENV170034561
CDYL01009948
332896
Bacteroidota
TTT
Lys
>WENV170034568
CDYL01010260
332896
Bacteroidota
TTT
Lys
>WENV170034880
CDYL01026080
332896
Bacteroidota
TTT
Lys
>WENV170034445
CDYL01004308
280478
Bacteroidota
GCC
Gly
>WENV170034447
CDYL01004308
280478
Bacteroidota
GCC
Gly
>WENV170034449
CDYL01004308
280478
Bacteroidota
GCC
Gly
>WENV170034512
CDYL01006999
280478
Bacteroidota
GCC
Gly
>WENV170034865
CDYL01025543
280478
Bacteroidota
GCC
Gly
>WENV170034867
CDYL01025543
280478
Bacteroidota
GCC
Gly
>WENV170034869
CDYL01025543
280478
Bacteroidota
GCC
Gly
>WENV170034577
CDYL01010871
175844
Bacteroidota
GGC
Ala
>WENV170034673
CDYL01016593
183889
Bacteroidota
GGC
Ala
>WENV170034416
CDYL01003027
158068
Bacteroidota
GGG
Pro
>WENV170034690
CDYL01017239
158068
Bacteroidota
GGG
Pro
>WENV170034713
CDYL01018692
176192
Bacteroidota
TCT
Arg
>WENV170034826
CDYL01024042
176192
Bacteroidota
TCT
Arg
>WENV170034954
CDYL01029088
176192
Bacteroidota
TCT
Arg
>WENV170034452
CDYL01004308
400088
Bacteroidota
GGT
Thr
>WENV170035036
CDYL01033293
484496
Bacteroidota
TTG
Gln
>WENV170034687
CDYL01017224
484496
Bacteroidota
TTG
Gln
>WENV170034714
CDYL01018692
285750
Bacteroidota
CCC
Gly
>WENV170034677
CDYL01016907
398836
Bacteroidota
GCA
Cys
>WENV170034741
CDYL01019854
398836
Bacteroidota
GCA
Cys
>WENV170034793
CDYL01022652
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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