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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
134 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170038290
CDYR01001144
170323
Bacteroidota
GGG
Pro
>WENV170038293
CDYR01001279
280478
Bacteroidota
GCC
Gly
>WENV170038309
CDYR01001742
29791
Bacteroidota
GCT
Ser
>WENV170038310
CDYR01001742
398860
Bacteroidota
CTC
Glu
>WENV170038320
CDYR01002494
398871
Bacteroidota
TTC
Glu
>WENV170038321
CDYR01002494
398871
Bacteroidota
TTC
Glu
>WENV170038349
CDYR01004020
183889
Bacteroidota
GGC
Ala
>WENV170038363
CDYR01004601
351598
Bacteroidota
CGG
Pro
>WENV170038370
CDYR01004793
351598
Bacteroidota
CGG
Pro
>WENV170038375
CDYR01005131
179697
Bacteroidota
TGT
Thr
>WENV170038388
CDYR01005564
289031
Bacteroidota
CAT
Met
>WENV170038397
CDYR01006013
365112
Bacteroidota
TTT
Lys
>WENV170038421
CDYR01006823
140771
Bacteroidota
>WENV170038424
CDYR01006823
140771
Bacteroidota
>WENV170038431
CDYR01007223
175904
Bacteroidota
CGG
Pro
>WENV170038432
CDYR01007223
280530
Bacteroidota
CCA
Trp
>WENV170038475
CDYR01009304
280553
Bacteroidota
TTT
Lys
>WENV170038491
CDYR01009727
182267
Bacteroidota
GTT
Asn
>WENV170038499
CDYR01010155
99847
Bacteroidota
GTA
Tyr
>WENV170038511
CDYR01010160
56493
Bacteroidota
TGA
Ser
>WENV170038512
CDYR01010160
175903
Bacteroidota
GTG
His
>WENV170038525
CDYR01011040
20449
Bacteroidota
GGA
Ser
>WENV170038527
CDYR01011067
484496
Bacteroidota
TTG
Gln
>WENV170038538
CDYR01011509
399200
Bacteroidota
CAT
Met
>WENV170038546
CDYR01012228
351598
Bacteroidota
CGG
Pro
>WENV170038551
CDYR01012233
57807
Bacteroidota
TGA
Ser
>WENV170038562
CDYR01013030
365112
Bacteroidota
TTT
Lys
>WENV170038571
CDYR01013070
182267
Bacteroidota
GTT
Asn
>WENV170038572
CDYR01013070
182267
Bacteroidota
GTT
Asn
>WENV170038577
CDYR01013490
99847
Bacteroidota
GTA
Tyr
>WENV170038591
CDYR01014338
57807
Bacteroidota
TGA
Ser
>WENV170038594
CDYR01014357
57807
Bacteroidota
TGA
Ser
>WENV170038608
CDYR01014826
398828
Bacteroidota
CCG
Arg
>WENV170038657
CDYR01016877
20492
Bacteroidota
GGA
Ser
>WENV170038668
CDYR01017562
289031
Bacteroidota
CAT
Met
>WENV170038682
CDYR01017792
20206
Bacteroidota
GGA
Ser
>WENV170038681
CDYR01017792
488746
Bacteroidota
CTG
Gln
>WENV170038684
CDYR01017792
280446
Bacteroidota
TTT
Lys
>WENV170038683
CDYR01017792
170323
Bacteroidota
GGG
Pro
>WENV170038687
CDYR01017797
351598
Bacteroidota
CGG
Pro
>WENV170038690
CDYR01017902
186874
Bacteroidota
CAT
Met
>WENV170038703
CDYR01018633
175904
Bacteroidota
CGG
Pro
>WENV170038711
CDYR01019012
20492
Bacteroidota
GGA
Ser
>WENV170038719
CDYR01019101
140771
Bacteroidota
>WENV170038722
CDYR01019101
140771
Bacteroidota
>WENV170038754
CDYR01019846
56493
Bacteroidota
TGA
Ser
>WENV170038786
CDYR01020281
56493
Bacteroidota
TGA
Ser
>WENV170038788
CDYR01020283
56493
Bacteroidota
TGA
Ser
>WENV170038803
CDYR01021005
99847
Bacteroidota
GTA
Tyr
>WENV170038814
CDYR01021438
295385
Bacteroidota
CCA
Trp
>WENV170038837
CDYR01022252
398829
Bacteroidota
CCT
Arg
>WENV170038839
CDYR01022318
365112
Bacteroidota
TTT
Lys
>WENV170038840
CDYR01022324
483416
Bacteroidota
CTG
Gln
>WENV170038849
CDYR01023143
351598
Bacteroidota
CGG
Pro
>WENV170038850
CDYR01023156
289031
Bacteroidota
CAT
Met
>WENV170038868
CDYR01024068
175906
Bacteroidota
GTG
His
>WENV170038877
CDYR01024752
118089
Bacteroidota
TAG
Leu
>WENV170038904
CDYR01025602
280478
Bacteroidota
GCC
Gly
>WENV170038905
CDYR01025615
20449
Bacteroidota
GGA
Ser
>WENV170038912
CDYR01025962
57807
Bacteroidota
TGA
Ser
>WENV170038930
CDYR01026428
289031
Bacteroidota
CAT
Met
>WENV170038935
CDYR01026749
483416
Bacteroidota
CTG
Gln
>WENV170038942
CDYR01026920
365112
Bacteroidota
TTT
Lys
>WENV170038943
CDYR01026933
484496
Bacteroidota
TTG
Gln
>WENV170038984
CDYR01028658
186874
Bacteroidota
CAT
Met
>WENV170038994
CDYR01028666
365112
Bacteroidota
TTT
Lys
>WENV170039005
CDYR01029066
280478
Bacteroidota
GCC
Gly
>WENV170039026
CDYR01030203
351598
Bacteroidota
CGG
Pro
>WENV170039027
CDYR01030205
117741
Bacteroidota
TAG
Leu
>WENV170039045
CDYR01030623
398836
Bacteroidota
GCA
Cys
>WENV170039049
CDYR01030927
480325
Bacteroidota
CTG
Gln
>WENV170039050
CDYR01030927
480325
Bacteroidota
CTG
Gln
>WENV170039056
CDYR01030935
488746
Bacteroidota
CTG
Gln
>WENV170039057
CDYR01030935
20766
Bacteroidota
GGA
Ser
>WENV170039058
CDYR01030935
170323
Bacteroidota
GGG
Pro
>WENV170039082
CDYR01032184
99847
Bacteroidota
GTA
Tyr
>WENV170039088
CDYR01032190
99847
Bacteroidota
GTA
Tyr
>WENV170039091
CDYR01032193
398860
Bacteroidota
CTC
Glu
>WENV170039092
CDYR01032194
398828
Bacteroidota
CCG
Arg
>WENV170039116
CDYR01033029
280557
Bacteroidota
CAT
Met
>WENV170039150
CDYR01034137
365112
Bacteroidota
TTT
Lys
>WENV170039184
CDYR01035281
159415
Bacteroidota
TAC
Val
>WENV170039185
CDYR01035281
159415
Bacteroidota
TAC
Val
>WENV170039186
CDYR01035281
159415
Bacteroidota
TAC
Val
>WENV170039214
CDYR01035536
99847
Bacteroidota
GTA
Tyr
>WENV170039250
CDYR01036170
399200
Bacteroidota
CAT
Met
>WENV170039274
CDYR01036875
280557
Bacteroidota
CAT
Met
>WENV170039275
CDYR01036876
398836
Bacteroidota
GCA
Cys
>WENV170039277
CDYR01036884
484496
Bacteroidota
TTG
Gln
>WENV170039286
CDYR01037529
183889
Bacteroidota
GGC
Ala
>WENV170039307
CDYR01038614
29791
Bacteroidota
GCT
Ser
>WENV170039308
CDYR01038614
398860
Bacteroidota
CTC
Glu
>WENV170039324
CDYR01039017
56072
Bacteroidota
TAA
Leu
>WENV170039331
CDYR01039251
99847
Bacteroidota
GTA
Tyr
>WENV170039337
CDYR01039492
176192
Bacteroidota
TCT
Arg
>WENV170039339
CDYR01039500
280451
Bacteroidota
CGT
Thr
>WENV170039353
CDYR01039967
351598
Bacteroidota
CGG
Pro
>WENV170039359
CDYR01039973
365112
Bacteroidota
TTT
Lys
>WENV170039361
CDYR01040033
170323
Bacteroidota
GGG
Pro
>WENV170039375
CDYR01041241
57807
Bacteroidota
TGA
Ser
>WENV170039389
CDYR01041668
175902
Bacteroidota
GGC
Ala
>WENV170039410
CDYR01042507
201819
Bacteroidota
CAT
Met
>WENV170039427
CDYR01043443
398836
Bacteroidota
GCA
Cys
>WENV170039431
CDYR01043450
280515
Bacteroidota
CCA
Trp
>WENV170039434
CDYR01043451
186874
Bacteroidota
CAT
Met
>WENV170039463
CDYR01044574
159415
Bacteroidota
TAC
Val
>WENV170039464
CDYR01044574
159415
Bacteroidota
TAC
Val
>WENV170039482
CDYR01044662
398836
Bacteroidota
GCA
Cys
>WENV170039484
CDYR01044671
365112
Bacteroidota
TTT
Lys
>WENV170039508
CDYR01045932
176192
Bacteroidota
TCT
Arg
>WENV170039509
CDYR01045936
398836
Bacteroidota
GCA
Cys
>WENV170039510
CDYR01045942
140771
Bacteroidota
>WENV170039513
CDYR01045942
140771
Bacteroidota
>WENV170039516
CDYR01045942
140771
Bacteroidota
>WENV170039528
CDYR01046320
365112
Bacteroidota
TTT
Lys
>WENV170039552
CDYR01047220
57807
Bacteroidota
TGA
Ser
>WENV170039554
CDYR01047316
175844
Bacteroidota
GGC
Ala
>WENV170039560
CDYR01047598
280451
Bacteroidota
CGT
Thr
>WENV170039559
CDYR01047598
398828
Bacteroidota
CCG
Arg
>WENV170039564
CDYR01047621
365112
Bacteroidota
TTT
Lys
>WENV170039583
CDYR01048576
175886
Bacteroidota
GGC
Ala
>WENV170039602
CDYR01048992
280446
Bacteroidota
TTT
Lys
>WENV170039598
CDYR01048992
398836
Bacteroidota
GCA
Cys
>WENV170039619
CDYR01050453
483416
Bacteroidota
CTG
Gln
>WENV170039640
CDYR01050910
398829
Bacteroidota
CCT
Arg
>WENV170039636
CDYR01050910
175838
Bacteroidota
GTT
Asn
>WENV170039637
CDYR01050910
175838
Bacteroidota
GTT
Asn
>WENV170039638
CDYR01050910
175838
Bacteroidota
GTT
Asn
>WENV170039639
CDYR01050910
175838
Bacteroidota
GTT
Asn
>WENV170039634
CDYR01050910
351598
Bacteroidota
CGG
Pro
>WENV170039629
CDYR01050910
56072
Bacteroidota
TAA
Leu
>WENV170039631
CDYR01050910
99847
Bacteroidota
GTA
Tyr
>WENV170039650
CDYR01051326
280478
Bacteroidota
GCC
Gly
>WENV170039691
CDYR01053026
57807
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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