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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
145 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170041056
CDYT01000378
117741
Bacteroidota
TAG
Leu
>WENV170041068
CDYT01000670
140771
Bacteroidota
>WENV170041071
CDYT01000670
140771
Bacteroidota
>WENV170041074
CDYT01000670
140771
Bacteroidota
>WENV170041089
CDYT01001160
480318
Bacteroidota
CTG
Gln
>WENV170041088
CDYT01001160
158068
Bacteroidota
GGG
Pro
>WENV170041109
CDYT01001749
280478
Bacteroidota
GCC
Gly
>WENV170041111
CDYT01001749
280478
Bacteroidota
GCC
Gly
>WENV170041116
CDYT01001806
351598
Bacteroidota
CGG
Pro
>WENV170041117
CDYT01001819
175838
Bacteroidota
GTT
Asn
>WENV170041118
CDYT01001819
175838
Bacteroidota
GTT
Asn
>WENV170041120
CDYT01001819
99847
Bacteroidota
GTA
Tyr
>WENV170041125
CDYT01002266
285360
Bacteroidota
TTT
Lys
>WENV170041130
CDYT01002570
280478
Bacteroidota
GCC
Gly
>WENV170041131
CDYT01002570
74084
Bacteroidota
CAG
Leu
>WENV170041137
CDYT01002578
291612
Bacteroidota
>WENV170041153
CDYT01003103
398836
Bacteroidota
GCA
Cys
>WENV170041157
CDYT01003218
295385
Bacteroidota
CCA
Trp
>WENV170041159
CDYT01003241
351598
Bacteroidota
CGG
Pro
>WENV170041171
CDYT01003533
398860
Bacteroidota
CTC
Glu
>WENV170041174
CDYT01003794
280553
Bacteroidota
TTT
Lys
>WENV170041181
CDYT01004042
280557
Bacteroidota
CAT
Met
>WENV170041182
CDYT01004042
280557
Bacteroidota
CAT
Met
>WENV170041185
CDYT01004051
186108
Bacteroidota
GTT
Asn
>WENV170041183
CDYT01004051
186108
Bacteroidota
GTT
Asn
>WENV170041184
CDYT01004051
186108
Bacteroidota
GTT
Asn
>WENV170041199
CDYT01004687
280557
Bacteroidota
CAT
Met
>WENV170041200
CDYT01004687
280557
Bacteroidota
CAT
Met
>WENV170041209
CDYT01004833
400088
Bacteroidota
GGT
Thr
>WENV170041214
CDYT01005082
74084
Bacteroidota
CAG
Leu
>WENV170041216
CDYT01005083
186108
Bacteroidota
GTT
Asn
>WENV170041217
CDYT01005083
186108
Bacteroidota
GTT
Asn
>WENV170041218
CDYT01005083
186108
Bacteroidota
GTT
Asn
>WENV170041238
CDYT01005829
351598
Bacteroidota
CGG
Pro
>WENV170041241
CDYT01005888
57807
Bacteroidota
TGA
Ser
>WENV170041244
CDYT01005897
203954
Bacteroidota
GTC
Asp
>WENV170041247
CDYT01006095
483416
Bacteroidota
CTG
Gln
>WENV170041254
CDYT01006100
74084
Bacteroidota
CAG
Leu
>WENV170041268
CDYT01006613
365112
Bacteroidota
TTT
Lys
>WENV170041276
CDYT01006897
178907
Bacteroidota
TCT
Arg
>WENV170041300
CDYT01008075
175838
Bacteroidota
GTT
Asn
>WENV170041301
CDYT01008075
175838
Bacteroidota
GTT
Asn
>WENV170041330
CDYT01008961
483416
Bacteroidota
CTG
Gln
>WENV170041331
CDYT01008963
280446
Bacteroidota
TTT
Lys
>WENV170041335
CDYT01009160
484496
Bacteroidota
TTG
Gln
>WENV170041336
CDYT01009196
404226
Bacteroidota
CCT
Arg
>WENV170041337
CDYT01009196
398871
Bacteroidota
TTC
Glu
>WENV170041338
CDYT01009196
398871
Bacteroidota
TTC
Glu
>WENV170041347
CDYT01009210
186874
Bacteroidota
CAT
Met
>WENV170041368
CDYT01009623
20449
Bacteroidota
GGA
Ser
>WENV170041373
CDYT01010016
203954
Bacteroidota
GTC
Asp
>WENV170041374
CDYT01010016
203954
Bacteroidota
GTC
Asp
>WENV170041375
CDYT01010016
203954
Bacteroidota
GTC
Asp
>WENV170041376
CDYT01010017
158068
Bacteroidota
GGG
Pro
>WENV170041383
CDYT01010300
365112
Bacteroidota
TTT
Lys
>WENV170041390
CDYT01010616
404226
Bacteroidota
CCT
Arg
>WENV170041391
CDYT01010616
398871
Bacteroidota
TTC
Glu
>WENV170041392
CDYT01010616
398871
Bacteroidota
TTC
Glu
>WENV170041399
CDYT01010884
175844
Bacteroidota
GGC
Ala
>WENV170041405
CDYT01010968
399200
Bacteroidota
CAT
Met
>WENV170041414
CDYT01010972
186874
Bacteroidota
CAT
Met
>WENV170041422
CDYT01011160
186142
Bacteroidota
GAT
Ile
>WENV170041425
CDYT01011247
158068
Bacteroidota
GGG
Pro
>WENV170041431
CDYT01011283
56072
Bacteroidota
TAA
Leu
>WENV170041446
CDYT01011864
365112
Bacteroidota
TTT
Lys
>WENV170041450
CDYT01011866
351598
Bacteroidota
CGG
Pro
>WENV170041453
CDYT01012030
175902
Bacteroidota
GGC
Ala
>WENV170041480
CDYT01012747
175902
Bacteroidota
GGC
Ala
>WENV170041484
CDYT01012784
399200
Bacteroidota
CAT
Met
>WENV170041496
CDYT01013149
480325
Bacteroidota
CTG
Gln
>WENV170041497
CDYT01013149
480325
Bacteroidota
CTG
Gln
>WENV170041505
CDYT01013154
280557
Bacteroidota
CAT
Met
>WENV170041504
CDYT01013154
280446
Bacteroidota
TTT
Lys
>WENV170041514
CDYT01013401
186142
Bacteroidota
GAT
Ile
>WENV170041515
CDYT01013401
186143
Bacteroidota
TGC
Ala
>WENV170041519
CDYT01013507
176192
Bacteroidota
TCT
Arg
>WENV170041529
CDYT01013789
176192
Bacteroidota
TCT
Arg
>WENV170041530
CDYT01013791
118089
Bacteroidota
TAG
Leu
>WENV170041531
CDYT01013791
73011
Bacteroidota
CAA
Leu
>WENV170041533
CDYT01013793
20206
Bacteroidota
GGA
Ser
>WENV170041532
CDYT01013793
488746
Bacteroidota
CTG
Gln
>WENV170041544
CDYT01014349
118089
Bacteroidota
TAG
Leu
>WENV170041564
CDYT01014718
398836
Bacteroidota
GCA
Cys
>WENV170041565
CDYT01014718
398836
Bacteroidota
GCA
Cys
>WENV170041575
CDYT01015056
289031
Bacteroidota
CAT
Met
>WENV170041583
CDYT01015576
175904
Bacteroidota
CGG
Pro
>WENV170041584
CDYT01015576
280530
Bacteroidota
CCA
Trp
>WENV170041598
CDYT01016198
56493
Bacteroidota
TGA
Ser
>WENV170041609
CDYT01016993
398836
Bacteroidota
GCA
Cys
>WENV170041622
CDYT01017803
280446
Bacteroidota
TTT
Lys
>WENV170041633
CDYT01018071
21127
Bacteroidota
GGA
Ser
>WENV170041644
CDYT01018319
280478
Bacteroidota
GCC
Gly
>WENV170041646
CDYT01018350
280478
Bacteroidota
GCC
Gly
>WENV170041652
CDYT01018625
398836
Bacteroidota
GCA
Cys
>WENV170041705
CDYT01020266
280478
Bacteroidota
GCC
Gly
>WENV170041701
CDYT01020266
280478
Bacteroidota
GCC
Gly
>WENV170041703
CDYT01020266
280478
Bacteroidota
GCC
Gly
>WENV170041706
CDYT01020267
398829
Bacteroidota
CCT
Arg
>WENV170041715
CDYT01021227
29791
Bacteroidota
GCT
Ser
>WENV170041721
CDYT01021373
203954
Bacteroidota
GTC
Asp
>WENV170041727
CDYT01021624
203954
Bacteroidota
GTC
Asp
>WENV170041737
CDYT01021973
20449
Bacteroidota
GGA
Ser
>WENV170041751
CDYT01022262
175904
Bacteroidota
CGG
Pro
>WENV170041766
CDYT01022888
57807
Bacteroidota
TGA
Ser
>WENV170041784
CDYT01023122
351598
Bacteroidota
CGG
Pro
>WENV170041786
CDYT01023209
20492
Bacteroidota
GGA
Ser
>WENV170041796
CDYT01023563
280478
Bacteroidota
GCC
Gly
>WENV170041807
CDYT01024484
182267
Bacteroidota
GTT
Asn
>WENV170041808
CDYT01024484
182267
Bacteroidota
GTT
Asn
>WENV170041809
CDYT01024484
182267
Bacteroidota
GTT
Asn
>WENV170041827
CDYT01025596
289031
Bacteroidota
CAT
Met
>WENV170041853
CDYT01026503
399200
Bacteroidota
CAT
Met
>WENV170041863
CDYT01026821
57807
Bacteroidota
TGA
Ser
>WENV170041866
CDYT01027107
289031
Bacteroidota
CAT
Met
>WENV170041871
CDYT01027414
484496
Bacteroidota
TTG
Gln
>WENV170041878
CDYT01027743
398836
Bacteroidota
GCA
Cys
>WENV170041888
CDYT01027756
175844
Bacteroidota
GGC
Ala
>WENV170041890
CDYT01027765
351598
Bacteroidota
CGG
Pro
>WENV170041893
CDYT01027851
178907
Bacteroidota
TCT
Arg
>WENV170041912
CDYT01028370
176192
Bacteroidota
TCT
Arg
>WENV170041918
CDYT01028376
140771
Bacteroidota
>WENV170041920
CDYT01028376
140771
Bacteroidota
>WENV170041923
CDYT01028413
57807
Bacteroidota
TGA
Ser
>WENV170041934
CDYT01028684
203954
Bacteroidota
GTC
Asp
>WENV170041947
CDYT01029545
280451
Bacteroidota
CGT
Thr
>WENV170041967
CDYT01029918
398828
Bacteroidota
CCG
Arg
>WENV170041974
CDYT01030400
175844
Bacteroidota
GGC
Ala
>WENV170041977
CDYT01030434
351598
Bacteroidota
CGG
Pro
>WENV170041991
CDYT01031191
285750
Bacteroidota
CCC
Gly
>WENV170042035
CDYT01032421
484496
Bacteroidota
TTG
Gln
>WENV170042045
CDYT01032989
280446
Bacteroidota
TTT
Lys
>WENV170042062
CDYT01033594
280446
Bacteroidota
TTT
Lys
>WENV170042064
CDYT01033851
56493
Bacteroidota
TGA
Ser
>WENV170042084
CDYT01034718
140771
Bacteroidota
>WENV170042086
CDYT01034718
140771
Bacteroidota
>WENV170042094
CDYT01035022
280553
Bacteroidota
TTT
Lys
>WENV170042098
CDYT01035154
175903
Bacteroidota
GTG
His
>WENV170042104
CDYT01035331
99847
Bacteroidota
GTA
Tyr
>WENV170042106
CDYT01035334
484496
Bacteroidota
TTG
Gln
>WENV170042111
CDYT01035614
398836
Bacteroidota
GCA
Cys
>WENV170042130
CDYT01036223
405877
Bacteroidota
GGT
Thr
>WENV170042125
CDYT01036223
158068
Bacteroidota
GGG
Pro
>WENV170042134
CDYT01036382
351598
Bacteroidota
CGG
Pro
>WENV170042147
CDYT01036683
183889
Bacteroidota
GGC
Ala
>WENV170042148
CDYT01036684
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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