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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
79 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170053489
CDZD01030115
172207
Bacteroidota
GGG
Pro
>WENV170053314
CDZD01020401
175838
Bacteroidota
GTT
Asn
>WENV170053315
CDZD01020401
175838
Bacteroidota
GTT
Asn
>WENV170053316
CDZD01020401
175838
Bacteroidota
GTT
Asn
>WENV170053666
CDZD01038373
175838
Bacteroidota
GTT
Asn
>WENV170053667
CDZD01038373
175838
Bacteroidota
GTT
Asn
>WENV170053668
CDZD01038373
175838
Bacteroidota
GTT
Asn
>WENV170053669
CDZD01038373
175838
Bacteroidota
GTT
Asn
>WENV170053670
CDZD01038373
175838
Bacteroidota
GTT
Asn
>WENV170053825
CDZD01046453
175904
Bacteroidota
CGG
Pro
>WENV170053074
CDZD01005630
289031
Bacteroidota
CAT
Met
>WENV170053276
CDZD01019059
289031
Bacteroidota
CAT
Met
>WENV170053284
CDZD01019182
289031
Bacteroidota
CAT
Met
>WENV170053429
CDZD01026008
289031
Bacteroidota
CAT
Met
>WENV170053223
CDZD01015458
280553
Bacteroidota
TTT
Lys
>WENV170053763
CDZD01043038
280557
Bacteroidota
CAT
Met
>WENV170053011
CDZD01001655
483416
Bacteroidota
CTG
Gln
>WENV170053205
CDZD01013863
483416
Bacteroidota
CTG
Gln
>WENV170053803
CDZD01045333
483416
Bacteroidota
CTG
Gln
>WENV170053168
CDZD01010867
398871
Bacteroidota
TTC
Glu
>WENV170053022
CDZD01002694
175906
Bacteroidota
GTG
His
>WENV170053370
CDZD01022691
351598
Bacteroidota
CGG
Pro
>WENV170053725
CDZD01041079
351598
Bacteroidota
CGG
Pro
>WENV170053538
CDZD01032563
118089
Bacteroidota
TAG
Leu
>WENV170053609
CDZD01035679
118089
Bacteroidota
TAG
Leu
>WENV170053390
CDZD01023946
280530
Bacteroidota
CCA
Trp
>WENV170053384
CDZD01023615
203954
Bacteroidota
GTC
Asp
>WENV170053520
CDZD01031699
172085
Bacteroidota
TAC
Val
>WENV170053521
CDZD01031699
172085
Bacteroidota
TAC
Val
>WENV170053818
CDZD01046066
172085
Bacteroidota
TAC
Val
>WENV170053819
CDZD01046066
172085
Bacteroidota
TAC
Val
>WENV170053820
CDZD01046066
172085
Bacteroidota
TAC
Val
>WENV170053608
CDZD01035667
405877
Bacteroidota
GGT
Thr
>WENV170053029
CDZD01003078
182267
Bacteroidota
GTT
Asn
>WENV170053039
CDZD01004020
20449
Bacteroidota
GGA
Ser
>WENV170053338
CDZD01022225
56072
Bacteroidota
TAA
Leu
>WENV170053183
CDZD01011855
175944
Bacteroidota
CAT
Met
>WENV170052996
CDZD01000471
175886
Bacteroidota
GGC
Ala
>WENV170053738
CDZD01041473
175886
Bacteroidota
GGC
Ala
>WENV170053591
CDZD01034810
179697
Bacteroidota
TGT
Thr
>WENV170053428
CDZD01025993
480404
Bacteroidota
TTG
Gln
>WENV170053387
CDZD01023652
480404
Bacteroidota
TTG
Gln
>WENV170053254
CDZD01018188
418894
Bacteroidota
TTC
Glu
>WENV170053255
CDZD01018188
418894
Bacteroidota
TTC
Glu
>WENV170053654
CDZD01037886
418894
Bacteroidota
TTC
Glu
>WENV170053655
CDZD01037886
418894
Bacteroidota
TTC
Glu
>WENV170053138
CDZD01008142
399200
Bacteroidota
CAT
Met
>WENV170053281
CDZD01019160
399200
Bacteroidota
CAT
Met
>WENV170053261
CDZD01018283
404109
Bacteroidota
CTC
Glu
>WENV170053226
CDZD01015583
186874
Bacteroidota
CAT
Met
>WENV170053532
CDZD01032147
186874
Bacteroidota
CAT
Met
>WENV170053058
CDZD01005180
46648
Bacteroidota
TAA
Leu
>WENV170052989
CDZD01000001
118432
Bacteroidota
CAG
Leu
>WENV170053805
CDZD01045354
118432
Bacteroidota
CAG
Leu
>WENV170053807
CDZD01045354
118432
Bacteroidota
CAG
Leu
>WENV170053511
CDZD01031234
280478
Bacteroidota
GCC
Gly
>WENV170052995
CDZD01000469
73011
Bacteroidota
CAA
Leu
>WENV170053860
CDZD01048131
280515
Bacteroidota
CCA
Trp
>WENV170053527
CDZD01032115
183889
Bacteroidota
GGC
Ala
>WENV170053262
CDZD01018283
191205
Bacteroidota
TGG
Pro
>WENV170053068
CDZD01005196
74084
Bacteroidota
CAG
Leu
>WENV170053388
CDZD01023773
159415
Bacteroidota
TAC
Val
>WENV170053389
CDZD01023773
159415
Bacteroidota
TAC
Val
>WENV170053512
CDZD01031241
159415
Bacteroidota
TAC
Val
>WENV170053664
CDZD01038359
480325
Bacteroidota
CTG
Gln
>WENV170053665
CDZD01038359
480325
Bacteroidota
CTG
Gln
>WENV170053663
CDZD01038359
480325
Bacteroidota
CTG
Gln
>WENV170053475
CDZD01029119
27502
Bacteroidota
GGA
Ser
>WENV170053581
CDZD01034353
27502
Bacteroidota
GGA
Ser
>WENV170053451
CDZD01027631
285750
Bacteroidota
CCC
Gly
>WENV170053129
CDZD01007708
373714
Bacteroidota
GCC
Gly
>WENV170053619
CDZD01036171
373714
Bacteroidota
GCC
Gly
>WENV170053620
CDZD01036171
373714
Bacteroidota
GCC
Gly
>WENV170052988
CDZD01000001
73509
Bacteroidota
GAG
Leu
>WENV170052990
CDZD01000001
73509
Bacteroidota
GAG
Leu
>WENV170053806
CDZD01045354
73509
Bacteroidota
GAG
Leu
>WENV170053808
CDZD01045354
73509
Bacteroidota
GAG
Leu
>WENV170053756
CDZD01042563
365112
Bacteroidota
TTT
Lys
>WENV170053563
CDZD01033461
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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