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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
162 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170054051
CDZE01003204
295385
Bacteroidota
CCA
Trp
>WENV170054878
CDZE01033685
295385
Bacteroidota
CCA
Trp
>WENV170054341
CDZE01013447
285360
Bacteroidota
TTT
Lys
>WENV170054669
CDZE01025860
117741
Bacteroidota
TAG
Leu
>WENV170055272
CDZE01048318
117741
Bacteroidota
TAG
Leu
>WENV170054764
CDZE01028694
398829
Bacteroidota
CCT
Arg
>WENV170055039
CDZE01039931
398829
Bacteroidota
CCT
Arg
>WENV170055054
CDZE01040389
398829
Bacteroidota
CCT
Arg
>WENV170054762
CDZE01028694
175838
Bacteroidota
GTT
Asn
>WENV170054763
CDZE01028694
175838
Bacteroidota
GTT
Asn
>WENV170053982
CDZE01000438
404226
Bacteroidota
CCT
Arg
>WENV170054527
CDZE01020762
175904
Bacteroidota
CGG
Pro
>WENV170055081
CDZE01041164
289031
Bacteroidota
CAT
Met
>WENV170055119
CDZE01042930
289031
Bacteroidota
CAT
Met
>WENV170054846
CDZE01032849
280557
Bacteroidota
CAT
Met
>WENV170054019
CDZE01001982
20492
Bacteroidota
GGA
Ser
>WENV170055018
CDZE01038820
20492
Bacteroidota
GGA
Ser
>WENV170054193
CDZE01008806
20206
Bacteroidota
GGA
Ser
>WENV170054352
CDZE01014270
20206
Bacteroidota
GGA
Ser
>WENV170054127
CDZE01006283
483416
Bacteroidota
CTG
Gln
>WENV170055256
CDZE01047825
483416
Bacteroidota
CTG
Gln
>WENV170055007
CDZE01038519
282712
Bacteroidota
TTT
Lys
>WENV170054571
CDZE01022224
201819
Bacteroidota
CAT
Met
>WENV170054572
CDZE01022224
201819
Bacteroidota
CAT
Met
>WENV170054745
CDZE01028628
201819
Bacteroidota
CAT
Met
>WENV170055254
CDZE01047821
201819
Bacteroidota
CAT
Met
>WENV170054277
CDZE01011819
56493
Bacteroidota
TGA
Ser
>WENV170054664
CDZE01025574
56493
Bacteroidota
TGA
Ser
>WENV170055166
CDZE01044850
56493
Bacteroidota
TGA
Ser
>WENV170055268
CDZE01048281
56493
Bacteroidota
TGA
Ser
>WENV170054012
CDZE01001589
175903
Bacteroidota
GTG
His
>WENV170054290
CDZE01012274
175903
Bacteroidota
GTG
His
>WENV170054801
CDZE01030758
118089
Bacteroidota
TAG
Leu
>WENV170054393
CDZE01015236
398872
Bacteroidota
GGT
Thr
>WENV170055053
CDZE01040374
398872
Bacteroidota
GGT
Thr
>WENV170055174
CDZE01045748
280530
Bacteroidota
CCA
Trp
>WENV170054326
CDZE01013034
203954
Bacteroidota
GTC
Asp
>WENV170054752
CDZE01028690
203954
Bacteroidota
GTC
Asp
>WENV170054977
CDZE01037734
203954
Bacteroidota
GTC
Asp
>WENV170054079
CDZE01004272
405877
Bacteroidota
GGT
Thr
>WENV170054876
CDZE01033682
405877
Bacteroidota
GGT
Thr
>WENV170054316
CDZE01013031
29791
Bacteroidota
GCT
Ser
>WENV170054656
CDZE01025440
29791
Bacteroidota
GCT
Ser
>WENV170054717
CDZE01027898
29791
Bacteroidota
GCT
Ser
>WENV170054964
CDZE01037365
182267
Bacteroidota
GTT
Asn
>WENV170054965
CDZE01037365
182267
Bacteroidota
GTT
Asn
>WENV170054966
CDZE01037365
182267
Bacteroidota
GTT
Asn
>WENV170054268
CDZE01011431
20449
Bacteroidota
GGA
Ser
>WENV170054004
CDZE01001173
21127
Bacteroidota
GGA
Ser
>WENV170054402
CDZE01015554
21127
Bacteroidota
GGA
Ser
>WENV170054520
CDZE01020662
56072
Bacteroidota
TAA
Leu
>WENV170054757
CDZE01028694
56072
Bacteroidota
TAA
Leu
>WENV170054913
CDZE01035480
56072
Bacteroidota
TAA
Leu
>WENV170055200
CDZE01046178
56072
Bacteroidota
TAA
Leu
>WENV170054207
CDZE01009603
57807
Bacteroidota
TGA
Ser
>WENV170054431
CDZE01016069
57807
Bacteroidota
TGA
Ser
>WENV170054454
CDZE01017503
57807
Bacteroidota
TGA
Ser
>WENV170054456
CDZE01017503
57807
Bacteroidota
TGA
Ser
>WENV170054577
CDZE01022498
57807
Bacteroidota
TGA
Ser
>WENV170054662
CDZE01025503
57807
Bacteroidota
TGA
Ser
>WENV170054665
CDZE01025574
57807
Bacteroidota
TGA
Ser
>WENV170055168
CDZE01045112
57807
Bacteroidota
TGA
Ser
>WENV170054837
CDZE01032466
175886
Bacteroidota
GGC
Ala
>WENV170054541
CDZE01021158
175902
Bacteroidota
GGC
Ala
>WENV170054905
CDZE01035187
175902
Bacteroidota
GGC
Ala
>WENV170055209
CDZE01046329
175902
Bacteroidota
GGC
Ala
>WENV170055078
CDZE01040858
179697
Bacteroidota
TGT
Thr
>WENV170054317
CDZE01013031
398860
Bacteroidota
CTC
Glu
>WENV170054362
CDZE01014369
398860
Bacteroidota
CTC
Glu
>WENV170054657
CDZE01025440
398860
Bacteroidota
CTC
Glu
>WENV170054718
CDZE01027898
398860
Bacteroidota
CTC
Glu
>WENV170054334
CDZE01013397
280451
Bacteroidota
CGT
Thr
>WENV170054282
CDZE01011859
418894
Bacteroidota
TTC
Glu
>WENV170054283
CDZE01011859
418894
Bacteroidota
TTC
Glu
>WENV170054776
CDZE01029910
418894
Bacteroidota
TTC
Glu
>WENV170054211
CDZE01009951
99847
Bacteroidota
GTA
Tyr
>WENV170054233
CDZE01010409
99847
Bacteroidota
GTA
Tyr
>WENV170054293
CDZE01012278
99847
Bacteroidota
GTA
Tyr
>WENV170054754
CDZE01028692
99847
Bacteroidota
GTA
Tyr
>WENV170054759
CDZE01028694
99847
Bacteroidota
GTA
Tyr
>WENV170055008
CDZE01038519
99847
Bacteroidota
GTA
Tyr
>WENV170055017
CDZE01038818
99847
Bacteroidota
GTA
Tyr
>WENV170054096
CDZE01004975
399200
Bacteroidota
CAT
Met
>WENV170054872
CDZE01033646
399200
Bacteroidota
CAT
Met
>WENV170055013
CDZE01038799
399200
Bacteroidota
CAT
Met
>WENV170054006
CDZE01001246
186874
Bacteroidota
CAT
Met
>WENV170054934
CDZE01036642
186874
Bacteroidota
CAT
Met
>WENV170055226
CDZE01046778
186874
Bacteroidota
CAT
Met
>WENV170054315
CDZE01013031
332896
Bacteroidota
TTT
Lys
>WENV170054386
CDZE01015134
332896
Bacteroidota
TTT
Lys
>WENV170054452
CDZE01017413
332896
Bacteroidota
TTT
Lys
>WENV170054887
CDZE01034064
332896
Bacteroidota
TTT
Lys
>WENV170055104
CDZE01042210
332896
Bacteroidota
TTT
Lys
>WENV170055123
CDZE01043145
332896
Bacteroidota
TTT
Lys
>WENV170054118
CDZE01005717
488746
Bacteroidota
CTG
Gln
>WENV170054284
CDZE01011896
488746
Bacteroidota
CTG
Gln
>WENV170054551
CDZE01021162
280478
Bacteroidota
GCC
Gly
>WENV170054553
CDZE01021162
280478
Bacteroidota
GCC
Gly
>WENV170054555
CDZE01021162
280478
Bacteroidota
GCC
Gly
>WENV170054556
CDZE01021162
280478
Bacteroidota
GCC
Gly
>WENV170054829
CDZE01031510
280478
Bacteroidota
GCC
Gly
>WENV170054208
CDZE01009603
20766
Bacteroidota
GGA
Ser
>WENV170054120
CDZE01005755
186108
Bacteroidota
GTT
Asn
>WENV170054121
CDZE01005755
186108
Bacteroidota
GTT
Asn
>WENV170054839
CDZE01032473
186108
Bacteroidota
GTT
Asn
>WENV170054840
CDZE01032473
186108
Bacteroidota
GTT
Asn
>WENV170055173
CDZE01045459
175844
Bacteroidota
GGC
Ala
>WENV170055234
CDZE01047381
175844
Bacteroidota
GGC
Ala
>WENV170054732
CDZE01028294
280515
Bacteroidota
CCA
Trp
>WENV170054406
CDZE01015561
183889
Bacteroidota
GGC
Ala
>WENV170054654
CDZE01025437
183889
Bacteroidota
GGC
Ala
>WENV170054074
CDZE01004272
158068
Bacteroidota
GGG
Pro
>WENV170054957
CDZE01037351
158068
Bacteroidota
GGG
Pro
>WENV170055073
CDZE01040826
158068
Bacteroidota
GGG
Pro
>WENV170055140
CDZE01044014
158068
Bacteroidota
GGG
Pro
>WENV170054368
CDZE01014663
186142
Bacteroidota
GAT
Ile
>WENV170054050
CDZE01003157
398828
Bacteroidota
CCG
Arg
>WENV170054436
CDZE01016352
398828
Bacteroidota
CCG
Arg
>WENV170055219
CDZE01046655
398828
Bacteroidota
CCG
Arg
>WENV170054086
CDZE01004688
74084
Bacteroidota
CAG
Leu
>WENV170054587
CDZE01022598
159415
Bacteroidota
TAC
Val
>WENV170054588
CDZE01022598
159415
Bacteroidota
TAC
Val
>WENV170054954
CDZE01037348
159415
Bacteroidota
TAC
Val
>WENV170054955
CDZE01037348
159415
Bacteroidota
TAC
Val
>WENV170054956
CDZE01037348
159415
Bacteroidota
TAC
Val
>WENV170054129
CDZE01006632
480325
Bacteroidota
CTG
Gln
>WENV170054225
CDZE01010356
140771
Bacteroidota
>WENV170054370
CDZE01014684
140771
Bacteroidota
>WENV170054373
CDZE01014684
140771
Bacteroidota
>WENV170054380
CDZE01015098
140771
Bacteroidota
>WENV170054382
CDZE01015098
140771
Bacteroidota
>WENV170055203
CDZE01046275
140771
Bacteroidota
>WENV170055206
CDZE01046275
140771
Bacteroidota
>WENV170054222
CDZE01010356
140771
Bacteroidota
>WENV170054322
CDZE01013033
176192
Bacteroidota
TCT
Arg
>WENV170054970
CDZE01037639
176192
Bacteroidota
TCT
Arg
>WENV170055095
CDZE01041700
176192
Bacteroidota
TCT
Arg
>WENV170055162
CDZE01044812
400088
Bacteroidota
GGT
Thr
>WENV170054008
CDZE01001448
280446
Bacteroidota
TTT
Lys
>WENV170054295
CDZE01012283
280446
Bacteroidota
TTT
Lys
>WENV170054384
CDZE01015131
280446
Bacteroidota
TTT
Lys
>WENV170054415
CDZE01015586
280446
Bacteroidota
TTT
Lys
>WENV170054567
CDZE01022204
280446
Bacteroidota
TTT
Lys
>WENV170054982
CDZE01037766
280446
Bacteroidota
TTT
Lys
>WENV170055155
CDZE01044490
280446
Bacteroidota
TTT
Lys
>WENV170053979
CDZE01000435
484496
Bacteroidota
TTG
Gln
>WENV170054367
CDZE01014661
484496
Bacteroidota
TTG
Gln
>WENV170054558
CDZE01021538
484496
Bacteroidota
TTG
Gln
>WENV170054677
CDZE01026239
484496
Bacteroidota
TTG
Gln
>WENV170055097
CDZE01041936
484496
Bacteroidota
TTG
Gln
>WENV170055232
CDZE01047020
484496
Bacteroidota
TTG
Gln
>WENV170055014
CDZE01038799
285750
Bacteroidota
CCC
Gly
>WENV170055233
CDZE01047029
188555
Bacteroidota
CAT
Met
>WENV170054369
CDZE01014663
186143
Bacteroidota
TGC
Ala
>WENV170054041
CDZE01002416
398836
Bacteroidota
GCA
Cys
>WENV170054085
CDZE01004643
398836
Bacteroidota
GCA
Cys
>WENV170054217
CDZE01009995
398836
Bacteroidota
GCA
Cys
>WENV170054585
CDZE01022591
398836
Bacteroidota
GCA
Cys
>WENV170054723
CDZE01028205
398836
Bacteroidota
GCA
Cys
>WENV170054868
CDZE01033544
398836
Bacteroidota
GCA
Cys
>WENV170055090
CDZE01041618
398836
Bacteroidota
GCA
Cys
>WENV170055269
CDZE01048311
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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