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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170056006
CDZF01031466
295385
Bacteroidota
CCA
Trp
>WENV170055995
CDZF01031034
285360
Bacteroidota
TTT
Lys
>WENV170055977
CDZF01030604
398829
Bacteroidota
CCT
Arg
>WENV170055992
CDZF01031027
175838
Bacteroidota
GTT
Asn
>WENV170055993
CDZF01031027
175838
Bacteroidota
GTT
Asn
>WENV170055693
CDZF01016451
289031
Bacteroidota
CAT
Met
>WENV170055948
CDZF01028717
289031
Bacteroidota
CAT
Met
>WENV170055984
CDZF01030783
289031
Bacteroidota
CAT
Met
>WENV170056131
CDZF01037800
289031
Bacteroidota
CAT
Met
>WENV170056256
CDZF01043168
280557
Bacteroidota
CAT
Met
>WENV170055639
CDZF01014295
20492
Bacteroidota
GGA
Ser
>WENV170055476
CDZF01006909
483416
Bacteroidota
CTG
Gln
>WENV170056138
CDZF01038131
483416
Bacteroidota
CTG
Gln
>WENV170056102
CDZF01036876
175903
Bacteroidota
GTG
His
>WENV170055486
CDZF01007381
351598
Bacteroidota
CGG
Pro
>WENV170055512
CDZF01007970
351598
Bacteroidota
CGG
Pro
>WENV170056033
CDZF01032647
351598
Bacteroidota
CGG
Pro
>WENV170056165
CDZF01039137
351598
Bacteroidota
CGG
Pro
>WENV170055385
CDZF01004327
398872
Bacteroidota
GGT
Thr
>WENV170055353
CDZF01003235
405877
Bacteroidota
GGT
Thr
>WENV170055968
CDZF01030176
29791
Bacteroidota
GCT
Ser
>WENV170056220
CDZF01041405
21127
Bacteroidota
GGA
Ser
>WENV170056194
CDZF01039967
56072
Bacteroidota
TAA
Leu
>WENV170055435
CDZF01005547
57807
Bacteroidota
TGA
Ser
>WENV170055708
CDZF01016854
57807
Bacteroidota
TGA
Ser
>WENV170055659
CDZF01014632
175944
Bacteroidota
CAT
Met
>WENV170055288
CDZF01000239
175886
Bacteroidota
GGC
Ala
>WENV170055600
CDZF01012397
175886
Bacteroidota
GGC
Ala
>WENV170055999
CDZF01031218
179697
Bacteroidota
TGT
Thr
>WENV170055969
CDZF01030176
398860
Bacteroidota
CTC
Glu
>WENV170055669
CDZF01015334
480404
Bacteroidota
TTG
Gln
>WENV170055558
CDZF01010350
418894
Bacteroidota
TTC
Glu
>WENV170056312
CDZF01045466
418894
Bacteroidota
TTC
Glu
>WENV170055696
CDZF01016504
404109
Bacteroidota
CTC
Glu
>WENV170056077
CDZF01034703
186874
Bacteroidota
CAT
Met
>WENV170056155
CDZF01038737
186874
Bacteroidota
CAT
Met
>WENV170055742
CDZF01018784
46648
Bacteroidota
TAA
Leu
>WENV170055527
CDZF01008799
332896
Bacteroidota
TTT
Lys
>WENV170055292
CDZF01000418
332896
Bacteroidota
TTT
Lys
>WENV170055408
CDZF01004813
332896
Bacteroidota
TTT
Lys
>WENV170056319
CDZF01045916
118432
Bacteroidota
CAG
Leu
>WENV170056039
CDZF01033045
284236
Bacteroidota
CGG
Pro
>WENV170055958
CDZF01029782
175844
Bacteroidota
GGC
Ala
>WENV170055666
CDZF01014979
280515
Bacteroidota
CCA
Trp
>WENV170056024
CDZF01032237
183889
Bacteroidota
GGC
Ala
>WENV170056189
CDZF01039952
183889
Bacteroidota
GGC
Ala
>WENV170055524
CDZF01008492
158068
Bacteroidota
GGG
Pro
>WENV170055922
CDZF01028199
158068
Bacteroidota
GGG
Pro
>WENV170056096
CDZF01036741
158068
Bacteroidota
GGG
Pro
>WENV170055697
CDZF01016504
191205
Bacteroidota
TGG
Pro
>WENV170056212
CDZF01040753
159415
Bacteroidota
TAC
Val
>WENV170056213
CDZF01040753
159415
Bacteroidota
TAC
Val
>WENV170056214
CDZF01040753
159415
Bacteroidota
TAC
Val
>WENV170055822
CDZF01022497
280446
Bacteroidota
TTT
Lys
>WENV170055888
CDZF01025446
280446
Bacteroidota
TTT
Lys
>WENV170056320
CDZF01045916
73509
Bacteroidota
GAG
Leu
>WENV170055391
CDZF01004416
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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